TABLE 1.
ECF σ factor | Nucleotide sequence
|
Reference | |
---|---|---|---|
−35 element | −10 element | ||
FecI | GAAAAT | TGTCCT | |
PA2468 | GAAAATa | TGTCGGa | 25 |
PA3899 | GATATTa | TTTTTCa | 25 |
SigR | GGGAAT | GTT | 10 |
SigB | GGgaacb | cGTTab | 10 |
AlgU/RpoE | GAAC | TCT | 29 |
CarQ | GAAAC | CGT | 29 |
SigW | TGAAAC | CGTA | 29 |
SigX | TGTAACT | CGAC | 29 |
PvdS | TAAAT | CGT | 29 |
Alignment of sequences of the putative pa2466 and pa3901 promoters with that of the fecA promoter. The amino acid sequences of the PA2468 and PA3899 σ factors in the region 4.2 are very similar to that of FecI.
Lowercase letters indicate sites of lower homology.