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. 2003 Apr;185(7):2387–2391. doi: 10.1128/JB.185.7.2387-2391.2003

TABLE 1.

Promoter sequences recognized by ECF σ factors

ECF σ factor Nucleotide sequence
Reference
−35 element −10 element
FecI GAAAAT TGTCCT
PA2468 GAAAATa TGTCGGa 25
PA3899 GATATTa TTTTTCa 25
SigR GGGAAT GTT 10
SigB GGgaacb cGTTab 10
AlgU/RpoE GAAC TCT 29
CarQ GAAAC CGT 29
SigW TGAAAC CGTA 29
SigX TGTAACT CGAC 29
PvdS TAAAT CGT 29
a

Alignment of sequences of the putative pa2466 and pa3901 promoters with that of the fecA promoter. The amino acid sequences of the PA2468 and PA3899 σ factors in the region 4.2 are very similar to that of FecI.

b

Lowercase letters indicate sites of lower homology.