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. 2003 Mar 7;100(6):3251–3256. doi: 10.1073/pnas.2627983100

Table 4.

Chromosomal clustering analysis of genes whose expression was altered specifically during senescence (M1) in two individual HMEC lines (48R and 184)

d No. of clusters
P value No. of clustered genes
P value
OBS RE OBS RE
Up-regulation in 48R
 1 kb 2 0.11 <0.001 4 0.21 <0.001
 2 kb 5 0.27 <0.001 10 0.55 <0.001
 5 kb 8 0.68 <0.001 16 1.36 <0.001
 10 kb 12 1.15 <0.001 24 2.31 <0.001
 20 kb 14 1.90 <0.001 29 3.81 <0.001
 50 kb 16 3.75 <0.001 34 7.53 <0.001
 100 kb 21 6.64 <0.001 44 13.4 <0.001
 200 kb 24 11.2 <0.001 53 22.8 <0.001
 500 kb 33 22.6 0.004 72 46.9 <0.001
 1 Mb 45 35.6 0.016 100 75.6 0.002
 2 Mb 59 52.1 0.054 144 115.7 0.001
 5 Mb 76 73.0 0.192 209 179.6 <0.001
Up-regulation in 184
 1 kb 2 0.05 <0.001 4 0.09 <0.001
 2 kb 2 0.08 <0.001 4 0.15 <0.001
 5 kb 4 0.21 <0.001 8 0.42 <0.001
 10 kb 5 0.33 <0.001 10 0.66 <0.001
 20 kb 6 0.60 <0.001 12 1.21 <0.001
 50 kb 7 1.11 <0.001 14 2.23 <0.001
 100 kb 7 1.83 <0.001 14 3.69 <0.001
 200 kb 8 3.23 0.008 16 6.56 0.008
 500 kb 12 6.92 0.009 24 14.1 0.016
 1 Mb 18 11.5 0.006 37 23.7 0.009
 2 Mb 22 18.4 0.123 46 39.1 0.162
 5 Mb 29 30.4 0.610 69 68.4 0.447

The occurrence of perturbed gene expression in two or more genes located within the distance shown defined a chromosomal cluster. Parameters are as indicated for Table 2