Table 2.
For each combination of microarray series, UpDp/UpD and tissue (Pl = placenta, Em = embryo, Cc = carcass, Br = brain, Lv = liver and Ht = heart) used in this study, the table shows the number of distinct non-control probe sets detecting differential expression that map to within (normal script) versus to only outside (italic script) the UpDp/UpD
| UpDp/UpD: | Prox Chrs 7 and 11 | Dist Chrs 7 and 11 | Chr 12 | Chr 18 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Array series | Number of distinct non-control probe sets | |||||||||||||||
| Mapping to within (normal) verus to only outside (italic) the UpDp/UpD | ||||||||||||||||
| Total | Total | luSLR| ≥ 6 | Total | luSLR| ≥ 6 | Total | luSLR| ≥ 6 | Total | luSLR| ≥ 6 | ||||||||
| Pl | Em | Cc | Br | Lv | Ht | Pl | Em | Pl | Em | Em | ||||||
| 430 | 45037 | 6595 | 222 | 212 | 3852 | 245 | ||||||||||
| 38442 | 1321 | 1084 | 41185 | 2246 | ||||||||||||
| U74 | 36701 | 3679 | 161 | 305 | 325 | 125 | 3157 | 107 | 101 | 2240 | 58 | 267 | ||||
| 33022 | 1227 | 2451 | 2650 | 854 | 33544 | 1128 | 1321 | 34461 | 603 | 4369 | ||||||
The table also provides the total number of non-control probe sets per microarray series and, for each UpDp/UpD in turn, the total number of probe sets that map to within versus to only outside the UpDp/UpD.