Table 2.
Data summary and phylotype OTUs
| Sample ID | Total reads | Trimmed tags | Unique tags | OTUs |
|---|---|---|---|---|
| 53R | 6,505 | 5,000 | 2,656 | 1,184 |
| 55R | 18,439 | 13,902 | 7,187 | 2,555 |
| 112R | 12,916 | 9,282 | 5,752 | 2,135 |
| 115R | 14,731 | 11,005 | 5,777 | 2,049 |
| 137 | 18,137 | 13,907 | 6,752 | 2,480 |
| 138 | 18,451 | 14,374 | 7,168 | 2,550 |
| FS312 | 6,605 | 4,835 | 2,769 | 1,362 |
| FS396 | 22,994 | 17,666 | 8,699 | 3,290 |
Value under trimmed tags are the numbers of reads remaining after the removal of primers and low-quality data. Values under unique tags are the numbers of distinct sequences within a set of trimmed tags. OTUs were calculated by comparing each tag to the V6RefDB database and combining tags with the nearest identical reference.