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. 2006 Jun;173(2):1047–1056. doi: 10.1534/genetics.106.056259

TABLE 2.

Estimated copy numbers of Ogre sequences per haploid genomes (1C) of selected Vicia species and P. sativum

1C(Mbp) 1C(pg) Dot-blot probes
Other estimates % in the genomed
Section Species LTR ORF1 ORF2 ORF3
Hypechusa V. pannonica 6,615 6.75 1–5 × 105 1 × 105 1 × 105 1 × 105 1 × 105a 38
V. hybrida 6,640 6.78 1 × 105 1 × 104 1 × 104 1–5 × 104 4
V. lutea 7,252 7.40 0.5–1 × 104 0.5–1 × 103 5 × 102 1–5 × 103 0.2
V. melanops 9,800 10.00 5 × 105 1 × 105 1 × 105 1 × 105 1 × 105b 26 (26)b
Cracca V. villosa 2,230 2.28 5 × 103 0.5–1 × 103 1 × 103 5 × 103 1
Attosa V. sepium 4,582 4.68 1 × 104 1 × 103 5 × 103 1–5 × 104 3
Vicia V. sativa 2,205 2.25 5 × 103 1–5 × 103 1–5 × 103 1–5 × 104 1 × 104b 6 (12)b
V. grandiflora 3,283 3.35 0.5–1 × 104 1 × 103 5 × 103 1–5 × 104 4
Wiggersia V. lathyroides 2,573 2.63 1 × 102 0–50 0.5–1 × 102 5 × 103 0.1
Narbonensis V. narbonensis 7,130 7.28 1–5 × 103 1 × 103 1–5 × 103 1–5 × 104 2
Faba V. faba 13,255 13.50 1 × 103 0.5–1 × 102 1–5 × 102 1–5 × 104 0.1
Peregrina V. peregrina 9,286 9.48 1–5 × 103 1–5 × 102 1 × 103 1–5 × 104 0.3
V. michauxii 8,134 8.30 1 × 103 1 × 102 1 × 103 1 × 104 0.3
P. sativum 4,337 4.43 1–5 × 102 5 × 102 1–5 × 103 1–5 × 104 1 × 104c 3 (6)c
a

Based on the number of positively hybridizing clones in the V. pannonica library.

b

According to Nouzová et al. (2001).

c

According to Neumann et al. (2003).

d

Calculations were based on estimated copy numbers of the ORF2 probe. Values in parentheses show genome proportions calculated using estimates obtained with other species-specific Ogre probes (as shown in the column “Other estimates”).