TABLE 3.

Power (Y = 2, 5, and 10) conditioned on trait minor allele frequency (MAF) for independently called SFPs

	Kruskal–Wallis			CLASS
MAF	2	5	10	2	5	10
0.05–0.10	0.44	0.67	0.78	0.42	0.63	0.73
0.10–0.15	0.54	0.75	0.85	0.58	0.71	0.85
0.15–0.20	0.68	0.82	0.92	0.66	0.83	0.93
0.20–0.25	0.84	0.91	0.96	0.85	0.93	0.97
0.25–0.30	0.86	0.95	0.97	0.83	0.96	0.97
0.30–0.35	0.88	0.97	0.99	0.91	0.95	0.99
0.35–0.40	0.89	0.97	1.00	0.90	0.97	1.00
0.40–0.45	0.87	0.98	1.00	0.90	0.97	1.00
0.45–0.50	0.92	0.99	1.00	0.93	0.98	1.00
Null rate	0.05	0.10	0.18	0.09	0.19	0.33