Table 1.
Genes with Stage-Specific Expression Patterns
| Stage | 2 Days on CIM | 4 Days on CIM | 3 Days on SIM | 6 Days on SIM | 10 Days on SIM | 15 Days on SIM |
|---|---|---|---|---|---|---|
| Genes with prototypic profiles | AIR1A wall/membrane disconnect protein (At4g12550) | Protodermal factor, PDF1 (At2g42840) |
Cold-regulated protein, KIN1 (At5g15960) | Putative expansin (At2g40610) | Hypothetical protein (At4g27730) | CAB protein CP29 (At5g01530) |
| High performers (most highly expressed) | Putative pathogenesis-related protein (At2g19970) | Nonspecific lipid transfer protein (At2g38540) |
Myrosinase-associated protein (At1g54000) | Aquaporin/MIP-like protein (At3g54820) | Peroxidase-like protein (At4g36430) | Hypothetical protein (At1g20620) |
| Hypothetical protein (At4g15610) | Gly-rich protein (At4g29020) |
Cold-regulated protein, KIN2 (At5g15970) | Putative pectate lyase (At4g24780) | Metallothionein 2b (At5g02380) |
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 3b (At5g38410) |
|
| β-Fructosidase (At3g13790) | Nonspecific lipid transfer protein (At2g38530) |
Glutathione S-transferase (At1g78380) |
Expansin (At1g69530) | Putative peroxidase (At2g18150) | Putative Gly-rich protein (At2g05520) | |
| Peroxidase (At2g38390) | Putative protein translocase (At2g37410) |
His kinase (AHK1) (At2g17820) | ARR5 response regulator (At3g48100) | Putative protein (At2g19120) | Calmodulin-like protein (At2g41100) | |
| Genes encoding transcription or signaling factors | Zinc finger protein (At3g28210) | Putative AP2 domain transcription factor (At4g23750) |
Transcription factor BBFa (At3g61850) |
CUP-SHAPED COTYLEDON2 (At5g53950) | Putative protein kinase (At2g32800) | Putative homeodomain transcription factor (At2g35940) |
| Putative Ser/Thr protein kinase (At1g51170) | Putative heat-shock transcription factor (At2g26150) |
Myb-like transcription factor (At5g60890) | Basic domain/Leu zipper transcription factor (At4g34590) | Myb-related transcription factor (At5g57620) | Putative RING-H2 zinc finger protein (At2g15580) | |
| RING-H2 zinc finger protein (At3g60220) | Homeodomain protein (At4g36740) |
PERIANTHIA transcription factor (At1g68640) | Putative protein kinase (At2g18470) | Myb-related transcription factor (At5g23000) | CCAAT binding transcription factor (At4g14540) |