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. 2003 Mar 21;100(7):3713–3718. doi: 10.1073/pnas.0636943100

Table 1.

Sedimentation equilibrium ultracentrifugation analysis of CzrA and NmtR

Sample, 5 μM Model Molarmass, g/mol Kdimer,×105 M−1* χ2, ×10−5
apo-CzrA Single, ideal 19307 4.66
Dissociable dimer 11975 1.7 (±0.3) 4.59
Co(II)1-CzrA§ Single, ideal 20358 5.42
Dissociable dimer 11851 4.8 (±0.1) 5.56
Ni(II)1-CzrA§ Single, ideal 20126 4.71
Dissociable dimer 12051 6.3 (±0.2) 5.34
Zn(II)1-CzrA§ Single, ideal 19784 4.85
Dissociable dimer 11858 4.5 (±0.2) 5.21
apo-NmtR Single, ideal 20069 4.57
Dissociable dimer 12549 1.9 (±0.4) 5.83
Co(II)1-NmtR§ Single, ideal 21952 5.96
Dissociable dimer 12849 3.9 (±0.4) 7.56
Ni(II)1-NmtR§ Single, ideal 21539 5.45
Dissociable dimer 12877 4.1 (±0.4) 6.22
Zn(II)1-NmtR§ Single, ideal 19359 5.41
Dissociable dimer 12597 3.7 (±0.6) 6.96
*

The association constant as estimated with a monomer–dimer equilibrium model (model 2). 

x2 = (∑Inline graphic[f(Xi − Yi)]2/Nn), where N is the number of observations, n is the number of fitting parameters, f( ) is the fitting function, Xi and Yi are data points, and Nn equals the degrees of freedom. 

Conditions: 10 mM Hepes, 0.40 M NaCl, 0.1 mM EDTA, pH 7.0; 25°C. 

§

Conditions: 10 mM Hepes, 0.40 M NaCl, pH 7.0; 25°C. 

Model 1 fits the data to a single, ideal species with calculated dimer molecular weights of 23,715 g/mol for CzrA and 25,409 g/mol for NmtR (see Materials and Methods). 

Model 2 fits the data to a reversible associating system assuming a monomer-dimer equilibrium. The calculated monomer molar masses are 11,857 g/mol for CzrA and 12,704 g/mol for NmtR (see Materials and Methods).