TABLE 1.
Gene and primer (oligonucleotide sequence) | Length (bp) | Amplified fragment size (bp) | Sourceb |
---|---|---|---|
tyv (rfbE) | |||
tyv-s (5"-GAG GAA GGG AAA TGA AGC TTT T-3") | 22 | 615 | M29682 |
tyv-as (5"-TAG CAA ACT GTC TCC CAC CAT AC-3") | 23 | M29682 | |
prt (rfbS) | |||
parat-s (5"-CTT GCT ATG GAA GAC ATA ACG AAC C-3") | 25 | 258 | M29682 |
parat-as, (5"-CGT CTC CAT CAA AAG CTC CAT AGA-3") | 24 | M29682 | |
viaB | |||
vi-s (5"-GTT ATT TCA GCA TAA GGA G-3") | 19 | 439 | D14156 |
vi-as (5"-CTT CCA TAC CAC TTT CCG-3") | 18 | D14156 | |
fliC | |||
fliCcom-s (5"-AAT CAA CAA CAA CCT GCA GCG-3") | 21 | L21912 | |
fliCd-as (5"-GCA TAG CCA CCA TCA ATA ACC-3") | 21 | L21912 | |
fliCa-as (5"-TAG TGC TTA ATG TAG CCG AAG G-3") | 22 | X03393 | |
fliCcom-fliCd-as | 750 (489)a | ||
fliCcom-fliCa-as | 329 |
Number in parentheses represents size of PCR product of H:j gene.
Primers were designed using sequences corresponding to indicated GenBank-EMBL-DDBL nucleotide sequence database accession numbers.