Table 5.

Nucleotide composition of simple sequence repeats in the R. solanacearum megaplasmid

	Total		Coding		Non-coding
	No.	%	No.	%	No.	%
Genome composition
A	347472	16.58	301622	16.62	45850	16.34
C	699983	33.41	613428	33.81	86555	30.83
G	700536	33.44	610348	33.64	90188	32.13
T	346518	16.54	288441	15.90	58077	20.69
Mononucleotide SSRs ≥ 6 bp
Total	722		350		372
A	172	23.82	83	23.71	89	23.93
C	169	23.41	94	26.86	75	20.16
G	197	27.29	130	37.14	67	18.01
T	184	25.49	43	12.29	141	37.90
G+C	366	50.69	224	64.00	142	38.17
A+T	356	49.31	126	36.00	230	61.83
Dinucleotide SSRs ≥ 6 bp
Total	7708		6727		981
AC/CA	190	2.47	143	2.13	47	4.79
AG/GA	135	1.75	71	1.06	64	6.52
AT/TA	38	0.49	15	0.22	23	2.35
CG/GC	7127	92.46	6297	93.61	830	84.61
CT/TC	129	1.67	82	1.22	47	4.79
GT/TG	166	2.15	119	1.77	47	4.79