TABLE 3.
Summary of the CD analysis of several DCD-derived and control peptides in different solutions: distilled water, 10 mM sodium phosphate (NaP), 10 mM NaP with 10 or 150 mM NaCl, TFE, or in the presence of unilamellar liposomes, such as DOPC and DOPC-DOPG (1:1 molar ratio)a
Peptide | Solution | Secondary structure (%) |
|||
---|---|---|---|---|---|
α-Helix | β-Sheet | Turn | Random coil | ||
DCD-1L | dH2O | 0.0 | 28.8 | 16.4 | 54.9 |
10 mM NaP | 0.0 | 17.5 | 20.5 | 62.0 | |
10 mM NaP-10 mM NaCl | 0.0 | 19.1 | 19.4 | 61.4 | |
10 mM NaP-150 mM NaCl | 0.0 | 32.1 | 0.0 | 67.9 | |
DOPC | 0.0 | 35.2 | 9.8 | 55.0 | |
DOPC-DOPG | 0.0 | 27.8 | 15.4 | 56.8 | |
60% TFE | 34.5 | 27.2 | 0.0 | 38.3 | |
LEK-45 | dH2O | 0.0 | 30.3 | 16.1 | 53.6 |
10 mM NaP | 0.0 | 13.6 | 21.2 | 62.2 | |
10 mM NaP-10 mM NaCl | 0.0 | 17.0 | 19.5 | 63.5 | |
10 mM NaP-150 mM NaCl | 0.0 | 41.5 | 0.0 | 58.5 | |
60% TFE | 28.0 | 31.0 | 0.0 | 41.0 | |
SSL-23 | dH2O | 0.0 | 38.2 | 14.8 | 47.0 |
10 mM NaP | 0.0 | 23.8 | 18.4 | 57.7 | |
DOPC | 0.0 | 13.7 | 21.5 | 64.8 | |
DOPC-DOPG | 2.2 | 49.2 | 3.8 | 44.8 | |
60% TFE | 14.1 | 40.8 | 4.9 | 49.2 | |
80% TFE | 32.9 | 27.6 | 0.0 | 39.5 | |
SSL-25 | dH2O | 0.0 | 22.3 | 20.7 | 57.0 |
60% TFE | 31.1 | 27.1 | 0.0 | 41.8 | |
SSL-29 | dH20 | 0.0 | 24.3 | 20.3 | 55.4 |
60% TFE | 12.2 | 46.2 | 0.0 | 41.7 | |
LL-37 | 10 mM NaP | 50.9 | 6.0 | 16.6 | 26.5 |
DOPC | 54.1 | 6.4 | 14.0 | 25.5 | |
DOPC-DOPG | 80.2 | 0.0 | 8.7 | 11.0 | |
DPI | dH2O | 0.0 | 34.3 | 15.4 | 50.3 |
10 mM NaP | 0.0 | 25.8 | 19.4 | 54.8 | |
DOPC-DOPG | 0.0 | 29.7 | 19.1 | 51.2 | |
60% TFE | 9.6 | 42.0 | 6.0 | 42.5 |
Data are based on Jasco secondary structure estimation software. dH2O, distilled water.