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. 2006 Jul 14;34(Web Server issue):W394–W399. doi: 10.1093/nar/gkl244

Table 1.

Example summary of NAST output describing the fate of each sequence in the submitted batch. This report is delivered with the MSA

Candidate sequence ID Candidate nucleotide count Errors Template IDa BLAST percent identity to template Longest insertion relative to template Candidate span aligned Candidate nucleotide count post-NAST
AKIW1006 1475 137800 96.81 6 1..1475 1475
AKIW1010 1486 85092 94.90 0 1..1486 1486
AKIW1012 1458 44738 86.50 8 1..1458 1458
AKIW1013 1423 137999 100.00 0 1..1423 1423
AKIW1030 1513 14808 98.94 0 3..1513 1511
AKIW448 1462 Xb
AKIW474 1473 134781 99.12 1 1..1473 1473
AE017333.1 4222645 75819 99.42 1 920782..922330 1549
AE017333.1 4222645 75819 99.42 1 158106..159654 1549
AE017333.1 4222645 75819 99.48 0 611802..613349 1548
AE017333.1 4222645 75819 99.42 0 9710..11257 1548
AE017333.1 4222645 75819 99.35 1 95150..96698 1549
AE017333.1 4222645 75819 99.35 1 complement (3121607..3123155) 1549
AE017333.1 4222645 75819 99.55 0 34408..35955 1548

aTemplate ID is an unique numerical identifier for a Greengenes 16S rRNA gene record.

bError column warns when the individual sequence alignment quality did not meet the user-defined thresholds. This table cell contains the text ‘Length:1238 Percent Indentity:93.21 Template:137857’. Error generated due to user’s requirement that each candidate sequence aligned to a template sequence along at least 1250 bases.