Table 5.
Contigs containing at least 5 ESTs that are unique to the FGAS dataset.
| Contig name | Annotation | Number of ESTs | Reference |
| CL1638Contig1 | No Gene Ontology Hit (no homology) | 24 | [76] |
| CL1293Contig2 | Wheat cold acclimation protein Wcor80 (Wcs120 homolog, manual annotation) | 19 | [65] |
| CL386Contig3 | Chitinase 1 | 18 | [31] |
| CL347Contig3 | Cold acclimation protein WCS120 (manual annotation) | 17 | [65] |
| CL2466Contig1 | Putative heat shock protein (E. Coli contaminant, manual annotation) | 16 | |
| CL3394Contig1 | Nitrogen regulation protein NR(II) (EC 2.7.3.-) (E. coli contaminant, manual annotation) | 12 | |
| CL7Contig23 | Aquaporin PIP1 | [77] | |
| CL40Contig14 | Chitinase IV | 11 | [31] |
| CL650Contig3 | Chloroplast-targeted COR protein (Wcor14c, manual annotation) | [76] | |
| CL1239Contig3 | Putative LMW heat shock protein | 10 | |
| CL2570Contig1 | Hypothetical protein OJ1015F07.4 | ||
| CL125Contig7 | O-methyltransferase | 9 | [75] |
| CL206Contig11 | Low molecular mass early light-inducible protein HV90, chloroplast precursor (ELIP) | [60] | |
| CL3635Contig1 | No Gene Ontology Hit | ||
| CL4047Contig1 | ABA responsive protein mRNA (manual annotation) | [78] | |
| CL52Contig12 | No Gene Ontology Hit | ||
| CL52Contig13 | No Gene Ontology Hit | ||
| CL619Contig5 | WSI76 protein induced by water stress (galactinol synthase, manual annotation) | [79] | |
| CL1228Contig3 | Leaf senescence protein-like | 8 | |
| CL1293Contig1 | Dehydrin (Wcs120 homolog, manual annotation) | [65] | |
| CL2543Contig2 | No Gene Ontology Hit | ||
| CL400Contig4 | Cysteine protease | [80] | |
| CL4107Contig1 | No Gene Ontology Hit | ||
| CL4776Contig1 | Probable arylsulfatase activating protein aslB (E. coli contaminant, manual annotation) | ||
| CL1051Contig5 | C repeat-binding factor 2 | 7 | [81] |
| CL2204Contig1 | No Gene Ontology Hit (Wheat Ice recristallization inhibitor, manual annotation) | [32] | |
| CL3474Contig1 | No Gene Ontology Hit | ||
| CL3792Contig1 | No Gene Ontology Hit | ||
| CL4454Contig1 | No Gene Ontology Hit | ||
| CL5468Contig1 | Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.-) (E. coli contaminant, manual annotation) | ||
| CL833Contig4 | Putative EREBP-like protein (putative AP2 domain transcription factor, manual annotation) | ||
| CL1318Contig2 | S-like Rnase | 6 | [82] |
| CL1368Contig4 | Beta-expansin | ||
| CL17Contig3 | Type 1 non-specific lipid transfer protein precursor (Fragment) | [83] | |
| CL20Contig27 | No Gene Ontology Hit | ||
| CL2425Contig2 | Putative lectin | [84] | |
| CL280Contig2 | Low temperature responsive barley gene blt14 (manual annotation) | [62] | |
| CL280Contig4 | Cold regulated protein pao29 (similar to blt14 manual annotation) | [62] | |
| CL2910Contig1 | CONSTANS-like protein CO6 | ||
| CL3212Contig2 | No Gene Ontology Hit | ||
| CL3324Contig2 | RING zinc finger protein-like | ||
| CL3647Contig2 | No Gene Ontology Hit | ||
| CL3778Contig2 | Putative phenylalanyl-tRNA synthetase alpha chain | ||
| CL4292Contig1 | C2H2 Zinc finger protein (manual annotation) | ||
| CL4895Contig1 | No Gene Ontology Hit | ||
| CL5228Contig1 | Putative inositol-(1,4,5) trisphosphate 3-kinase | ||
| CL5712Contig1 | Putative ABCF-type protein (anthocyanin transport) | ||
| CL5985Contig1 | Hypothetical protein P0508B05.10 | ||
| CL6056Contig1 | Putative calcium binding EF-hand protein (caleosin: lipid body trafficking, manual annotation) | ||
| CL6257Contig1 | No Gene Ontology Hit | ||
| CL6493Contig1 | No Gene Ontology Hit | ||
| CL861Contig2 | No Gene Ontology Hit | ||
| CL1051Contig2 | C repeat-binding factor 2 | 5 | [81] |
| CL1182Contig3 | OSJNBa0043A12.18 protein (putative transcription factor) | ||
| CL1279Contig2 | Isoflavone reductase homolog (EC 1.3.1.-) | ||
| CL1366Contig3 | Putative UDP-glucose: flavonoid 7-O-glucosyltransferase | ||
| CL206Contig6 | High molecular mass early light-inducible protein HV58, chloroplast precursor (ELIP) | [60] | |
| CL3647Contig1 | No Gene Ontology Hit | ||
| CL4058Contig1 | Myb-related protein Hv33 | ||
| CL411Contig7 | No Gene Ontology Hit (Wheat Ice recristallization inhibitor, manual annotation) | [32] | |
| CL4350Contig2 | Similarity to protein kinase | GenBank AY738149 | |
| CL4537Contig1 | Putative ACT domain-containing protein | ||
| CL4642Contig1 | Chitinase 1 | [31] | |
| CL4666Contig1 | Farnesylated protein 1 | [85] | |
| CL4825Contig1 | Hypothetical protein P0473D02.6 (Hypothetical protein OJ1368_G08.21) | ||
| CL6137Contig1 | No Gene Ontology Hit | ||
| CL6258Contig1 | Putative sodium-dicarboxylate cotransporter | ||
| CL6567Contig1 | Putative arabinogalactan protein | ||
| CL6634Contig1 | No Gene Ontology Hit | ||
| CL6741Contig1 | Putative b-keto acyl reductase (fatty acid elongase, waxes biosyntheisis) | ||
| CL6821Contig1 | Putative strictosidine synthase (alkaloid biosynthesis) | ||
| CL7090Contig1 | No Gene Ontology Hit | ||
| CL721Contig3 | No Gene Ontology Hit | ||
| CL7241Contig1 | No Gene Ontology Hit | ||
| CL7243Contig1 | No Gene Ontology Hit | ||
| CL7272Contig1 | Early light-inducible protein | [60] | |
| CL7415Contig1 | No Gene Ontology Hit | ||
| CL7455Contig1 | ABC1 family protein-like | ||
| CL754Contig3 | Chitinase 3 | [31] | |
| CL7581Contig1 | Aspartate transaminase, mitochondrial | ||
| CL7608Contig1 | Putative aspartic proteinase nepenthesin I | ||
| CL7617Contig1 | No Gene Ontology Hit (barley Blt14 homolog, manual annotation) | [62] | |
| CL7686Contig1 | No Gene Ontology Hit | ||
| CL7701Contig1 | Putative FH protein interacting protein FIP2 (potassium channel tetramerization) | ||
| CL7785Contig1 | No Gene Ontology Hit | ||
| CL7794Contig1 | No Gene Ontology Hit | ||
| CL807Contig3 | Putative diphosphonucleotide phosphatase (calcineurin-like phosphoesterase) | ||
| CL861Contig5 | No Gene Ontology Hit | ||
| CL963Contig4 | OSJNBb0013O03.11 protein (bHLH transcription factor, manual annotation) |