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. Author manuscript; available in PMC: 2006 Aug 14.
Published in final edited form as: J Phys Chem B. 2005 Nov 24;109(46):21963–21970. doi: 10.1021/jp052969l

Table 2.

Entopy, TSA (T=300 K) in kcal/mol (eq 11) for various bin sizes (eq 5) and future sample sizes, nf, obtained with the HSMC method for different values of the external force, K*

Bin size nf K=8 K =20 K =40 K =100
Δαk/30 20,000 99.9 (3) 96.5 (2) 92.6 (4) 89.2 (3)
" 40,000 99.4 (3) 96.3 (1) 92.6 (3) 89.1 (3)
" 80,000 99.3 (3) 96.2 (2) 92.7 (3) 89.2 (3)
" 160,000 99.3 (2) 96.2 (2) 92.7 (3) 89.2 (3)
Δαk/60 20,000 99.4 (3) 96.0 (2) 92.1 (4) 88.7 (3)
" 40,000 99.1 (2) 96.0 (2) 92.3 (3) 88.8 (3)
" 80,000 99.1 (2) 95.9 (1) 92.4 (3) 88.9 (3)
" 160,000 99.1 (2) 95.9 (2) 92.4 (3) 88.9 (3)
TSQH 110.2 (4) 106.5 (3) 104.2 (4) 98.0 (5)
TSLS 114.7 (5) 110.1 (3) 105.9 (4) 101.4 (5)
*

Δαk is defined in eq 8. The HSMC results are based on a sample of 600 conformations. K is given in kcal/(mol·Å). The statistical errors are given in parentheses, e.g., 99.1 (3) = 99.1 ±0.3. SQH is the quasi-harmonic entropy (eq 21) and SLS (eqs 11 and 13) is the local states (LS) entropy obtained for b=1 and l=10. The entropy is defined up to an additive constant.