Table 1.
ORF | Predicted size, amino acids | 3′ Distance to next ORF, bp* | Database match, accession no. | E value† |
---|---|---|---|---|
trmU | 354 | 198 | Probable tRNA methyltransferase, P73755 | 8 × 10−56 |
II.1 | 92 | 97 | ORF in flagellar gene cluster, AF072135 | 5 × 10−17 |
ctrA | 237 | 62 | CtrA/response regulator, AF051939 | 3 × 10−87 |
dnlJ | 707 | −4 | DNA ligase, Z11910 | 1 × 10−166 |
recG | 680 | RecG/recombination, X59550 | 1 × 10−123 | |
fabF | 420 | −4 | KAS II/fatty acid synthesis, AJ235273 | 1 × 10−122 |
chp | 390 | 192 | Conserved hypothetical protein, U32728 | 1 × 10−43 |
orfg1 | 107 | 114 | None | |
orfg2 | 393 | 184 | T4 DNA packaging protein, X52394 | 5 × 10−03 |
orfg3 | 396 | 246 | øC31 portal protein, AJ006589 | 2 × 10−15 |
orfg4 | 184 | 31 | HK97 prohead protease protein, U18319 | 3 × 10−08 |
orfg5 | 398 | 171 | øC31 capsid protein, AJ006589 | 2 × 10−12 |
orfg6 | 179 | 48 | None | |
orfg7 | 112 | −4 | None | |
orfg8 | 135 | 41 | None | |
orfg9 | 137 | 8 | Antigen A, Y09161 | 2 × 10−03 |
orfg10 | 108 | 211 | None | |
orfg11 | 219 | 11 | λ Tail component homolog, AF007380 | 9 × 10−07 |
orfg12 | 247 | 47 | None | |
orfg13 | 243 | −4 | None | |
orfg14 | 150 | 1 | Putative lipoprotein, D86610 | 8 × 10−05 |
orfg15 | 346 | 82 | None | |
orfg16 | 100 | 103 | None | |
orfg17 | 113 | 87 | None | |
orfg18 | 651 | 93 | Similar to rhamnosyl transferase, AL008967 | 4.5 × 10−02 |
orfg19 | 69 | 60 | None | |
cysE | 279 | CysE/cysteine biosynthesis, X59594 | 4 × 10−69 |
Negative values indicate translational overlap.
† Number of equal scoring matches expected by random chance; results with a value < 10−1 are included.