TABLE 2.
GenBank accession numbers of the D1 and D2 sequences of a variety of yeast species and related fungi, used to estimate nucleotide substitution rates
| Phylum, class, and species | Accession no. | Phylum, class, and species | Accession no. | |
|---|---|---|---|---|
| Ascomycota (n = 65) | ||||
| Archiascomycetes | ||||
| Schizosaccharomyces pombe | U40085 | |||
| Taphrina deformans | U94948 | |||
| Euascomycetes, Aureobasidium pullulans | AF050239 | |||
| Hemiascomycetes | ||||
| Arxula terrestris | U40103 | |||
| Blastobotrys nivea | U40110 | |||
| Candida bombi | U45706 | |||
| Candida cariosilignicola | U70188 | |||
| Candida caseinolytica | U70250 | |||
| Candida castellii | U69876 | |||
| Candida fennica | U45715 | |||
| Candida galacta | U45820 | |||
| Candida humilis | U69878 | |||
| Candida insectorum | U45791 | |||
| Candida nemodendra | U70246 | |||
| Candida norvegica | U62299 | |||
| Candida quercitrusa | U45831 | |||
| Candida quercuum | U70184 | |||
| Candida rugosa | U45727 | |||
| Candida sake | U45728 | |||
| Candida santjacobensis | U45811 | |||
| Candida shehatae | U45761 | |||
| Candida torresii | U45731 | |||
| Candida tropicalis | U45749 | |||
| Candida vini | U70247 | |||
| Clavispora lusitaniae | U44817 | |||
| Clavispora opuntiae | U44818 | |||
| Debaryomyces castellii | U45841 | |||
| Debaryomyces udenii | U45844 | |||
| Dekkera anomala | U84244 | |||
| Dipodascus albidus | U40081 | |||
| Dipodascus ingens | U40127 | |||
| Eremothecium coryli | U43390 | |||
| Galactomyces geotrichum | U40118 | |||
| Issatchenkia orientalis | U76347 | |||
| Issatchenkia terricola | U76345 | |||
| Kluyveromyces lodderae | U68551 | |||
| Kluyveromyces thermotolerans | U69581 | |||
| Lipomyces starkeyi | U45824 | |||
| Metschnikowia reukaufii | U44825 | |||
| Myxozyma mucilagina | U94945 | |||
| Myxozyma udenii | U76353 | |||
| Nadsonia commutata | U73598 | |||
| Pichia angophorae | U75521 | |||
| Pichia anomala | U74592 | |||
| Pichia cactophila | U75731 | |||
| Pichia euphorbiae | U73580 | |||
| Pichia farinosa | U45739 | |||
| Pichia inositovora | U45848 | |||
| Pichia japonica | U73579 | |||
| Pichia membranifaciens | U75725 | |||
| Pichia onychis | U75421 | |||
| Pichia opuntiae | U76203 | |||
| Pichia quercuum | U75416 | |||
| Pichia toletana | U75720 | |||
| Saccharomyces cerevisiae | U44806 | |||
| Saccharomycopsis capsularis | U40082 | |||
| Saturnispora dispora | U94937 | |||
| Stephanoascus smithiae | U76531 | |||
| Torulaspora delbrueckii | U72156 | |||
| Williopsis mucosa | U75961 | |||
| Williopsis salicorniae | U75968 | |||
| Yarrowia lipolytica | U40080 | |||
| Zygoascus hellenicus | U40125 | |||
| Zygosaccharomyces mellis | U72164 | |||
| Zygozyma smithiae | U84242 | |||
| Basidiomycota (n = 80) | ||||
| Hymenomycetes | ||||
| Agaricus arvensis | U11910 | |||
| Apiotrichum porosum | AF189833 | |||
| Auricularia auricula-judae | L20278 | |||
| Boletus rubinellus | L20279 | |||
| Bullera crocea | AF075508 | |||
| Bullera oryzae | AF075511 | |||
| Bulleromyces albus | AF075500 | |||
| Calocera cornea | AF291302 | |||
| Cryptococcus albidus | AF075474 | |||
| Cryptococcus curvatus | AF189834 | |||
| Cryptococcus diffluens | AF075502 | |||
| Cryptococcus gastricus | AF137600 | |||
| Cryptococcus heveanensis | AF075467 | |||
| Cryptococcus humicola | AF189836 | |||
| Cryptococcus laurentii | AF075469 | |||
| Cryptococcus magnus | AF181851 | |||
| Cryptococcus skinneri | AF189835 | |||
| Cryptococcus terreus | AF075479 | |||
| Cystofilobasidium capitatum | AF075465 | |||
| Fellomyces borneensis | AF189877 | |||
| Fellomyces fuzhouensis | AF075506 | |||
| Filobasidiella neoformans | AF075526 | |||
| Filobasidium capsuligenum | AF075501 | |||
| Ganoderma australe | X78780 | |||
| Mrakia frigida | AF075463 | |||
| Tremella aurantia | AF189842 | |||
| Tremella tropica | AF042251 | |||
| Trichosporon aquatile | AF075520 | |||
| Trichosporon montevideense | AF105397 | |||
| Trichosporon mucoides | AF075515 | |||
| Udeniomyces pyricola | AF075507 | |||
| Urediniomycetes | ||||
| Aurantiosporium subnitens | AF009846 | |||
| Bensingtonia phyllada | AF189894 | |||
| Eocronartium muscicola | L20280 | |||
| Erythrobasidium hasegawianum | AF189899 | |||
| Helicogloea variabilis | L20282 | |||
| Kondoa aerea | AF189901 | |||
| Kurtzmanomyces tardus | AF177410 | |||
| Leucosporidium felli | AF189907 | |||
| Leucosporidium scottii | AF070419 | |||
| Melampsora lini | L20283 | |||
| Occultifur externus | AF189909 | |||
| Pachnocybe ferruginea | L20284 | |||
| Rhodosporidium kratochvilovae | AF071436 | |||
| Rhodotorula aurantiaca | AF189921 | |||
| Rhodotorula bogoriensis | AF189923 | |||
| Rhodotorula ferulica | AF189927 | |||
| Rhodotorula fujisanensis | AF189928 | |||
| Rhodotorula glutinis | AF070430 | |||
| Rhodotorula hordea | AF189933 | |||
| Rhodotorula minuta | AF189945 | |||
| Rhodotorula vanillica | AF189970 | |||
| Sporidiobolus ruineniae | AF070438 | |||
| Sporidiobolus salmonicolor | AF070439 | |||
| Sporobolomyces coprosmae | AF189980 | |||
| Sporobolomyces coprosmicola | AF189981 | |||
| Sporobolomyces dracophylli | AF189982 | |||
| Sporobolomyces falcatus | AF075490 | |||
| Sporobolomyces gracilis | AF189985 | |||
| Sporobolomyces roseus | AF070441 | |||
| Sporobolomyces ruber | AF189992 | |||
| Sporobolomyces sasicola | AF177412 | |||
| Sporobolomyces singularis | AF189996 | |||
| Sporobolomyces tsugae | AF189998 | |||
| Sterigmatomyces elviae | AF177415 | |||
| Ustilaginomycetes | ||||
| Doassinga callitrichis | AF007525 | |||
| Entorrhiza aschersonia | AF009851 | |||
| Entyloma calendulae | AJ235296 | |||
| Exobasidium rhododendri | AF009856 | |||
| Malassezia furfur | AJ249955 | |||
| Melanotaenium endogenum | AJ235294 | |||
| Pseudozyma fusiformata | AJ235304 | |||
| Rhodotorula bacarum | AF190002 | |||
| Rhodotorula phylloplana | AF190004 | |||
| Thecaphora amaranthi | AF009873 | |||
| Tilletia caries | AJ235308 | |||
| Tilletiaria anomala | AJ235284 | |||
| Tilletiopsis flava | AJ235285 | |||
| Ustacystis waldsteiniae | AF009880 | |||
| Ustilago maydis | AJ235275 |