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. 2003 Jun;77(11):6227–6234. doi: 10.1128/JVI.77.11.6227-6234.2003

TABLE 2.

Methylation of the LCR and E6 gene of HPV-16 in clinical samples from Brazil and New Mexicoa

Site(s) Sample type (total no.) No. of samples showing:
% of amplifiable samples with methylation
Methylation No methylation
Brazil Asymptomatic (14) 8 6 57.1
CIN I (3) 0 3 0
Invasive cancer (16) 2 14 12.5
New Mexico Asymptomatic (11) 5 6 45.4
CIN I (10) 3 7 30
CIN III (10) 2 8 20
Invasive cancer (17) 0 17 0
Bothb Asymptomatic (25) 13 12 52
CIN I and III (23) 5 18 21.7
Invasive cancer (33) 2 31 6.1
a

CpG methylation was determined by cleavage of the DNA preparations with the restriction enzyme McrBC and subsequent PCR amplification of a genomic segment of HPV-16 corresponding to the promoter and E6 gene as shown in Fig. 3.

b

Data from both cohorts were combined, results with CIN I and CIN III were united into one group of precursor lesions, and DNA preparations that could not be amplified were omitted.