Table 1.
Name | Sequence* | Purpose |
Ex-1b-f | GCGAATTCCAGTAGCCAAGGACTAGTAG | Forward and reverse primers to make exon 1b fragment |
Int-1b-r | GCGGATCCAGAATTGCTCGCGCCCTTAG | |
Int-1b-f | GCGGATCCAGTGAATGTGCCGCTGCAGT | Forward and reverse primers to make exon 4 fragment |
Int-4-r | GCGGTACCTCGGAGAGGGAACTGTAATC | |
Int-4-s | GCGGTACCTGGCTGAGTGATCAAACCGT | Forward and reverse primers to make exon 5 fragment |
Ex-5-r | CGAAGCTTGGCGGCGCGTAAGGACAGG | |
IVS4+5G>C-f | GAGTCCGGGTAGcAGCCAGCACGGAG | Forward and reverse overlap PCR primers to make IVS4+5G>C mutant |
IVS4+5G>C-r | CTCCGTGCTGGCTgCTACCCGGACTC | |
IVS5-11A>G-f | CTCCCTTGCCCCAgCCGCCCCCAGG | Forward and reverse overlap PCR primers to make IVS5-11A>G mutant |
IVS5-11A>G-f | CCTGGGGGCGGcTGGGGCAAGGGAG | |
IVS4-1G>T-f | CGTTTTCAtAGAAAGAT | Forward and reverse overlap PCR primers to make IVS4-1G>T mutant |
IVS4-1G>T-f | ATCTTTCTaTGAAAACG | |
T7 promoter | TAATACGACTCACTATAGGG | Forward primer to pcDNA T7 promoter to detect minigene mRNA |
PCREx-1b-f | TGTCGGCCGTCTCCTCATCTTCC | Forward and reverse primers to detect endogenous and minigene mRNA |
PCREx-5-r | TTGCGCTCCCTCTTTCTCCATTTG | |
GFP-f | GACGGCAACATCCTGGGGCACAAG | Forward and reverse primers to GFP |
GFP-r | CGGCGGCGGTCACGAACTCC | |
GAPDH-f | TGATGACATCAAGAAGGTGGTGAAG | Forward and reverse primers to GAPDH |
GAPDH-r | TCCTTGGAGGCCATGTGGGCCAT |
*Primers are 5' to 3', mutations are in lowercase