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. 2006 Jul 11;7:59. doi: 10.1186/1471-2350-7-59

Table 1.

Oligonucleotides used in this study

Name Sequence* Purpose
Ex-1b-f GCGAATTCCAGTAGCCAAGGACTAGTAG Forward and reverse primers to make exon 1b fragment
Int-1b-r GCGGATCCAGAATTGCTCGCGCCCTTAG
Int-1b-f GCGGATCCAGTGAATGTGCCGCTGCAGT Forward and reverse primers to make exon 4 fragment
Int-4-r GCGGTACCTCGGAGAGGGAACTGTAATC
Int-4-s GCGGTACCTGGCTGAGTGATCAAACCGT Forward and reverse primers to make exon 5 fragment
Ex-5-r CGAAGCTTGGCGGCGCGTAAGGACAGG
IVS4+5G>C-f GAGTCCGGGTAGcAGCCAGCACGGAG Forward and reverse overlap PCR primers to make IVS4+5G>C mutant
IVS4+5G>C-r CTCCGTGCTGGCTgCTACCCGGACTC
IVS5-11A>G-f CTCCCTTGCCCCAgCCGCCCCCAGG Forward and reverse overlap PCR primers to make IVS5-11A>G mutant
IVS5-11A>G-f CCTGGGGGCGGcTGGGGCAAGGGAG
IVS4-1G>T-f CGTTTTCAtAGAAAGAT Forward and reverse overlap PCR primers to make IVS4-1G>T mutant
IVS4-1G>T-f ATCTTTCTaTGAAAACG
T7 promoter TAATACGACTCACTATAGGG Forward primer to pcDNA T7 promoter to detect minigene mRNA
PCREx-1b-f TGTCGGCCGTCTCCTCATCTTCC Forward and reverse primers to detect endogenous and minigene mRNA
PCREx-5-r TTGCGCTCCCTCTTTCTCCATTTG
GFP-f GACGGCAACATCCTGGGGCACAAG Forward and reverse primers to GFP
GFP-r CGGCGGCGGTCACGAACTCC
GAPDH-f TGATGACATCAAGAAGGTGGTGAAG Forward and reverse primers to GAPDH
GAPDH-r TCCTTGGAGGCCATGTGGGCCAT

*Primers are 5' to 3', mutations are in lowercase