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. 2006 Jul 20;6:66. doi: 10.1186/1471-2180-6-66

Table 3.

Primers used in this study

Primer Sequence of primers Comments Product size (bp)
2pbadFOR 5'-CACCATGGCCAAGTTCTTTATC-3' Sense primer for the cloning of orf2-coding into pBAD202 3192
2pbadREV 5'-TTACTGCCCCTTCGAATCGTTT-3' Antiense primer for the cloning of orf2-coding into pBAD202
1rtFOR 5'-CCACGCCGTTCGTTCGCATCT-3' Sense primer for RT-PCR analysis of orf1 577
1rtREV 5'-GCTTGGCGAACCACCGGTTGA-3' Antisense primer for RT-PCR analysis orf1
2rtFOR 5'-CGAAGCTGAAGCCGTTGAC-3' Sense primer for RT-PCR analysis orf2 511
2rtREV 5'-TCGTGCTGTCGGCGGTGTT-3' Antisense primer for RT-PCR analysis orf2
3rtFOR 5'-CGCGCTCACCGACCTGATGTT-3' Sense primer for RT-PCR analysis orf3 531
3rtREV 5'-AGCGCGAGGAACACGACGAGC-3' Antisense primer for RT-PCR analysis orf3
4rtFOR 5'-AACATCCTGCGCTGAAGGTCAAC-3' Sense primer for RT-PCR analysis orf4 537
4rtREV 5'-TGACAGCCCCTCTTCCGCCATCAC-3' Antisense primer for RT-PCR analysis orf4
5rtFOR 5'-TACGTGCTGCGCGAACTGAAG-3' Sense primer for RT-PCR analysis orf5 594
5rtREV 5'-AACAGCCACATCACGCAAAACAC-3' Antisense primer for RT-PCR analysis orf5
6rtFOR 5'-TCGAATGGGTGCTGAACCGC-3' Sense primer for RT-PCR analysis orf6 477
6rtREV 5'-CGAATTCTTCCGAGTTGGGGCT-3' Antisense primer for RT-PCR analysis orf6
8rtFOR 5'-CAAGGTCGTGACCGGCGTGTA-3' Sense primer for RT-PCR analysis orf8 517
8rtREV 5'-GATCATCGACAGCACCATCAGC-3' Antisense primer for RT-PCR analysis orf8
9rtFOR 5'-CTATTCGATCAATACGCTCACG-3' Sense primer for RT-PCR analysis orf9 493
9rtREV 5'-CGCATAGACGGCGAACACCAC-3' Antisense primer for RT-PCR analysis orf9
10rtFOR 5'-AACTCGCTGCAGATCTCGGAC-3' Sense primer for RT-PCR analysis orf10 521
10rtREV 5'-ATCGCGAACTGCTTGTAGAACTG-3' Antisense primer for RT-PCR analysis orf10
11rtFOR 5'-TCGCGGCGAAGATGGAGGAC-3' Sense primer for RT-PCR analysis orf11 522
11rtREV 5'-TCGTCGCCATCGGATGGAACAT-3' Antisense primer for RT-PCR analysis orf11
12rtFOR 5'-CGCGCTCAACGACTGGTTCCT-3' Sense primer for RT-PCR analysis orf12 520
12rtREV 5'-CAGTTGCGATCGGTCGTAGGTC-3' Antisense primer for RT-PCR analysis orf12
13rtFOR 5'-CAGGTTACACAGATGCGAACGA-3' Sense primer for RT-PCR analysis orf13 530
13rtREV 5'-AAGCCCGACACGTGACGAGCG-3' Antisense primer for RT-PCR analysis orf13
14rtFOR 5'-ACGCCGACCGACATCTTTCCG-3' Sense primer for RT-PCR analysis orf14 615
14rtREV 5'-CTGCGTGCTGCCGTTCATCTGC-3' Antisense primer for RT-PCR analysis orf14
15rtFOR 5'-AGAGTTTGATCATGGCTCAG-3' Sense primer for RT-PCR analysis rRNA 16S gene 1490
16rtREV 5'-TACCTTGTTACGACTTCAC-3' Antisense primer for RT-PCR analysis rRNA 16S gene