Table 2.
Putative identification of dominant (most predictable) OTUs from DFA
| OTU | Group(s) (accession nos.) |
|---|---|
| 402 | γ-Proteobacteria - CHABI-7 subgroup (DQ009149) |
| 417 | Actinobacter (DQ157868) |
| 465 | SAR86 (AY552545) |
| 531 | γ-Proteobacteria - SPOTS121 subgroup (DQ009145) |
| 534 | γ-Proteobacteria - SPOTS121 subgroup (DQ009143) |
| 555 | Alteromonas (AF408841) |
| 621 | Bacteroidetes (DQ009091) |
| Fibrobacter (DQ009159) | |
| 624 | SAR406 (DQ009157) |
| 666 | SAR11 (DQ009203) |
| 675 | α-Proteobacteria (DQ009262) |
| 681 | SAR11 (DQ009194) |
| 687 | SAR116 (DQ009272) |
| SAR11 (DQ009253) | |
| Alteromonas (AF408829) | |
| 690 | Pelagibacter ubique str. 1062 (SAR 11) (NC_007205) |
| 699 | SAR11 (AY033325) |
| 704 | α-Proteobacteria (DQ009256) |
| SAR11 (AF151254) | |
| 719 | SAR11 (DQ009166) |
| 734 | Verrucomicrobia (AY033323) |
| 739 | Verrucomicrobia (DQ009368) |
| Bacteroidetes (DQ009104) | |
| 769 | Bacteroidetes (DQ157869) |
| 799 | Bacteroidetes (DQ646394) |
| 914 | Prochlorococcus (NC_007335) |
| 1040 | Synechococcus (DQ009365) |
| γ-Proteobacteria - OM182 subgroup (DQ009156) |
ARISA OTU numbers (ARISA fragment length, in base pairs) and group identities (phylogenetic groups of known marine sequences with matching ARISA lengths) for 22 of the 36 unique dominant OTUs from DFA listed in Table 1. OTUs not appearing here, but in Table 1, do not match any known marine sequence. GenBank accession numbers of identifying clones/cultures are also listed.