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. 2003 Jun;77(12):6743–6752. doi: 10.1128/JVI.77.12.6743-6752.2003

TABLE 2.

Frequency of antigen-specific CD8+ T cells recognizing the PR82V76-84 and/or PR82A76-84 peptide in the HIV-1 protease genea

Patient Amino acid at position 82 % IFN-γ-producing CD8+ T cells
HLA-A2
PR82V76-84 PR82A76-84
SNC <0.050 <0.050 +
SNC <0.050 <0.050 +
3005 Val <0.050 <0.050
3085 Val <0.050 <0.050
3148 Val <0.050 <0.050
3152 Val <0.050 <0.050
2004 Ala <0.050 <0.050
3004 Ala <0.050 <0.050
3025 Ala <0.050 <0.050
3028 Ala/Val <0.050 <0.050
3047 Ala <0.050 <0.050
3062 Ala <0.050 <0.050
3071 Ala <0.050 <0.050
3072 Ala <0.050 <0.050
3075 Ala <0.050 <0.050
3102 Ala <0.050 <0.050
2081 Val 0.166 <0.050 +
3011 Val 0.204 <0.050 +
3013 Val 0.070 <0.050 +
3043 Val <0.050 <0.050 +
3057 Val 0.056 <0.050 +
3151 Val 0.104 0.075 +
3153 Val 0.280 0.100 +
3156 Val 0.330 0.180 +
3012 Ala <0.050 <0.050 +
3023 Ala 0.130 0.360 +
3037 Ala <0.050 0.061 +
3040 Ala 0.054 0.123 +
3050 Ala <0.050 <0.050 +
3084 Ala/Val <0.050 <0.050 +
3088 Ala <0.050 <0.050 +
a

Cells gated on IFN-γ-producing CD3+ CD8+ CD4 T cells were detected by intracellular CFC. The proportion of patients with the V82A mutation is greater in the group of HLA-A2-negative patients than in the HLA-A2-positive group, but the difference does not reach statistical significance (P = 0.17; chi square test). Levels above 0.05 with the background subtracted (mean background + 2SD = 0.05) are considered positive. SNC, seronegative control; Ala/Val, presence of viral sequences with both Ala and Val at position 82.

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