TABLE 4.

Groups of 152 genes of Salmonella enterica serovar Typhimurium LT2 based on comparison patterns between various Salmonella serovars

Group	No. of genes	Homology witha:
		S. enterica subsp. I serovar Typhimurium			S. enterica subsp. I serovar Typhi		S. enterica subsp. I serovar Enteritidis PT4	S. enterica subsp. I serovar Gallinarum 287/91	S. enterica subsp. I serovar Pullorum	S. enterica subsp. I serovar Dublin	S. enterica subsp. I serovar Paratyphi A ATCC 9150	S. enterica subsp. IIIb serovar Diarizonae 611,v1,5,(7)	S. bongori subsp. V 12419
		LT2	DT104	SL1344	CT18	Ty2
1	31	+	+	+	+	+	+	+	+	+	+	+	+
2	9	+	+	+	+	+	+	+	+	+	+	+	−
3	10	+	+	+	− or =	− or =	− or =	−	− or =	− or =	−	−	−
4	3	+	+	+	+	+	−	−	−	− or =	−	−	−
5	12	+	+	+	+	+	+	+	+	− or =	+	+	+
6	8	+	+	+	−	−	+	+	+ or =	+	−	−	−
7	8	+	+	+	+	+	+	+	− or =	+	+	+	+
8	9	+	+	+	+	+	+	+	+	+ or =	+	− or =	−
9	5	+	+	+	+	+	+	+	− or =	+	+	+	−
10	3	+	+	+	+	+	−	−	−	+	−	−	−
11	4	+	+	+	+	+	+	+	+	− or =	+	−	− or =
12	2	+	+	+	+	+	+	− or =	− or =	+	− or =	− or =	− or =
13	3	+	+	+	+	+	+	− or =	+	− or =	+	+	+
14	4	+	+	+	+	+	+	+	+	+	+	−	+
15	3	+	+	+	+	+	−	−	−	−	+	−	−
16	3	+	+	+	+	+	+	+	−	− or =	+	− or =	− or =
17b	35
Total	152

^a+, high homology, highest matched sequence size is more than 50% of query gene; =, moderate homology, highest matched sequence size is between 20 and 50% of query gene; −, low homology, highest matched sequence size is less than 20% of query gene.

^bThe genes of group 17 showed various comparison patterns. The data are shown in Data S2 in the supplemental material.