Table 6.
Characteristics of GS 20 sequencing errors
Nandina | Platanus | combined | |
proportion of length-variant HR errors | 100.0 | 61.5 | 84.8 |
proportion of TLI HR errors | 0.0 | 38.5 | 15.2 |
proportion of A/T HR errors | 95.0 | 100.0 | 97.0 |
proportion of C/G HR errors | 5.0 | 0.0 | 3.0 |
proportion of errors associated with HR sets | 55.0 | 46.2 | 51.5 |
proportion of errors associated with HRs ≥ 5 | 45.0 | 76.9 | 57.6 |
average length of HR associated with error | 5.4 | 6.5 | 5.8 |
proportion of HR-associated insertion errors | 85.0 | 69.2 | 78.8 |
proportion of HR-associated deletion errors | 15.0 | 30.8 | 21.2 |
Characteristics of observed GS 20 sequencing errors that were associated with homopolymer runs. All values are reported in percent. HR = homopolymer run; TLI = transposition-like insertion (see text).