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A 397-nucleotide sequence within brk-1PA has significant identity to ∼14 regions elsewhere in the N. crassa genome. Alignment shown is of the brk-1PA element and three sequences within contigs 3.213 (contig 7.12), 3.622 (contig 7.81), and 3.400 (contig 7.32) (Neurospora Genome Sequence Project, Broad Institute). Inverted repeats are indicated by arrows and direct repeats in the brk-1 region are underlined.
