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. 2006 Aug;173(4):2187–2198. doi: 10.1534/genetics.105.044677

TABLE 3.

Preferential comparisons between hypotheses H0, H1, H2, and H3

H0 H1 H2 H3
H0 Score Score Score, LRT
H1 Score Scorea LRTb
H2 Score Scorea LRTb
H3 Score, LRT LRTb LRTb

All comparisons can be implemented as exact tests.

a

The more general score statistic described in the domains section is required.

b

The exact test requires an optimization routine to maximize the likelihood, as the likelihood ratio does not take a closed form.