TABLE 2.
Correlations between genomic GC content and the frequency of GC-rich (GAPW) and GC-poor (FYMINK) amino acids in complete NPM proteins and discriminating between N-terminal and C-terminal domains
NPM lineage | Spearman rank correlation coefficient, rS | P-value |
---|---|---|
NPM1 | Complete | |
GC fourfold vs. GAPW | 0.018 | 0.839 |
GC fourfold vs. FYMINK | −0.216 | 0.726 |
N terminus | ||
GC fourfold vs. GAPW | 0.131 | 0.569 |
GC fourfold vs. FYMINK | 0.000 | 0.922 |
C terminus | ||
GC fourfold vs. GAPW | 0.036 | 0.671 |
GC fourfold vs. FYMINK | 0.668 | 0.454 |
NPM2 | Complete | |
GC fourfold vs. GAPW | −0.571 | 0.095* |
GC fourfold vs. FYMINK | −0.786 | 0.027** |
N terminus | ||
GC fourfold vs. GAPW | −0.147 | 0.582 |
GC fourfold vs. FYMINK | −0.720 | 0.156 |
C terminus | ||
GC fourfold vs. GAPW | −0.927 | 0.009*** |
GC fourfold vs. FYMINK | −0.299 | 0.688 |
NPM3 | Complete | |
GC fourfold vs. GAPW | 0.559 | 0.046** |
GC fourfold vs. FYMINK | −0.667 | 0.039** |
N terminus | ||
GC fourfold vs. GAPW | 0.404 | 0.396 |
GC fourfold vs. FYMINK | −0.118 | 0.909 |
C terminus | ||
GC fourfold vs. GAPW | 0.134 | 0.875 |
GC fourfold vs. FYMINK | 0.134 | 0.811 |
The asterisks indicate significance levels as *P < 0.1, **P < 0.05, ***P < 0.01.