TABLE 1.
AP1/FUL homologs included in this study
| Taxon | Family/subfamily | Genea | Accession no. |
|---|---|---|---|
| Dendrobium grex | Orchidaceae/— | DOMADS2 | AF198175 |
| Crocus sativus | Iridaceae/— | Kcap1b | AY337929 |
| Lilium lancifolium | Liliaceae/— | LisFUL | DQ792945 |
| Allium sp. | Alliaceae/— | AlFL | AY306138 |
| Agapanthus africanus | Agapanthaceae/— | AgsFUL | DQ792946 |
| Elaeis guineensis | Arecaceae/— | PAS1 | AF411840 |
| Tradescantia virginiana | Commelinaceae/— | TvFL1 | AY306190 |
| Cyperus longus | Cyperaceae/Cyperoideae | CylFUL | DQ792947 |
| Xyris sp. | Xyridaceae/Xyridoideae | XsFUL | DQ792948 |
| Joinvillea ascendens | Joinvilleaceae/— | JaFUL | DQ792949 |
| Streptochaeta angustifolia | Poaceae/Anomochlooideae | SaFUL2 | DQ792950 |
| Pharus sp. | Poaceae/Pharoideae | PsFUL2 | DQ792951 |
| Dendrocalamus latiflorus | Poaceae/Bambusoideae | DlMADS1 | AY395714 |
| Lithachne humilis | Poaceae/Bambusoideae | LhFUL2 | DQ792952 |
| Oryza sativa | Poaceae/Ehrhartoideae | OsMADS14 | AF058697 |
| OsMADS15 | AF058698 | ||
| OsMADS18 | AF091458 | ||
| Ehrharta erecta | Poaceae/Ehrhartoideae | EeFUL1 | DQ792953 |
| EeFUL2 | DQ792954 | ||
| Leersia virginica | Poaceae/Ehrhartoideae | LvFUL1 | DQ792955 |
| LvFUL2 | DQ792956 | ||
| Brachypodium distachyon | Poaceae/Pooideae | BdFUL1 | DQ792957 |
| BdFUL2a | DQ792958 | ||
| BdFUL2b | DQ792959 | ||
| Triticum aestivum | Poaceae/Pooideae | TaMADS11 | AB007504 |
| Triticum monococcum | Poaceae/Pooideae | TmFUL2a | DQ792960 |
| TmFUL2b | DQ792961 | ||
| Hordeum vulgare | Poaceae/Pooideae | HvMADS3 | AJ249143 |
| HvMADS5 | AJ249144 | ||
| HvMADS8 | AJ249146 | ||
| Lolium temulentum | Poaceae/Pooideae | LtMADS1 | AF035378 |
| LtMADS2 | AF035379 | ||
| Phalaris canariensis | Poaceae/Pooideae | PcFUL1 | DQ792962 |
| PcFUL2 | DQ792963 | ||
| Avena strigosa | Poaceae/Pooideae | AstFUL1 | DQ792964 |
| Avena sativa | Poaceae/Pooideae | AsFUL1a | DQ792965 |
| AsFUL1b | DQ792966 | ||
| AsFUL2 | DQ792967 | ||
| Eleusine indica | Poaceae/Chloridoideae | EiFUL1a | DQ792968 |
| EiFUL1b | DQ792969 | ||
| EiFUL2 | DQ792970 | ||
| Eragrostis pilosa | Poaceae/ Chloridoideae | EpFUL1 | DQ792971 |
| EpFUL2 | DQ792972 | ||
| Chasmanthium latifolium | Poaceae/Centothecoideae | ClFUL1 | DQ792973 |
| ClFUL2 | DQ792974 | ||
| Setaria viridis | Poaceae/Panicoideae | SvFUL1 | DQ792975 |
| Setaria italica | Poaceae/Panicoideae | SiFUL1 | DQ792976 |
| SiFUL2 | DQ792977 | ||
| Sorghum bicolor | Poaceae/Panicoideae | SbFUL1 | DQ792978 |
| Poaceae/Panicoideae | SbMADS2 | U32110 | |
| Zea mays | Poaceae/Panicoideae | ZmMADS4 | AJ430641 |
| ZmMADS15 | AJ430632 | ||
| ZmMADS3 | AF112150 | ||
| ZAP1 | L46400 | ||
| Pennisetum glaucum | Poaceae/Panicoideae | PgFUL1a | DQ792979 |
| PgFUL1b | DQ792980 |
Voucher information for each sequence is included in GenBank. Newly generated sequences are underlined.
a
Gene names of new sequences correspond to the species' initials and the putative phylogenetic position: prior to the duplication event (FUL), following the duplication event in the OsMADS14 clade (FUL1), or following the duplication event in the OsMADS15 clade (FUL2). Distinct alleles are designated a or b.