TABLE 4.
Contribution of each size class of variants to the θ-values
| θw | θΠ | |||||||
|---|---|---|---|---|---|---|---|---|
| Size class | Frequency | Obs. | Exp. | Difference | Obs. | Exp. | Difference | |
| All | Size 1 | 40 | 7.44 | 2.28 | 5.16 | 0.66 | 0.12 | 0.54 | 
| Size 1–10% | 10 | 1.86 | 4.80 | −2.94 | 0.46 | 1.25 | −0.79 | |
| Size 10–25% | 4 | 0.74 | 2.04 | −1.30 | 0.94 | 1.79 | −0.85 | |
| Size 25–75% | 11 | 2.05 | 2.51 | −0.46 | 5.19 | 3.67 | 1.52 | |
| Size 75–99% | 1 | 0.19 | 0.65 | −0.46 | 0.03 | 0.46 | −0.43 | |
| Total | 66 | 12.27 | 12.27 | 7.29 | 7.29 | |||
| Africans | Size 1 | 31 | 7.29 | 2.82 | 4.47 | 1.55 | 0.36 | 1.19 | 
| Size 1–10% | 9 | 2.12 | 2.35 | −0.23 | 0.97 | 0.69 | 0.28 | |
| Size 10–25% | 2 | 0.47 | 2.81 | −2.34 | 0.52 | 1.86 | −1.34 | |
| Size 25–75% | 9 | 2.12 | 3.19 | −1.07 | 4.18 | 3.80 | 0.38 | |
| Size 75–99% | 0 | 0 | 0.82 | −0.82 | 0 | 0.51 | −0.51 | |
| Total | 51 | 11.99 | 11.99 | 7.22 | 7.22 | |||
| Asians | Size 1 | 7 | 1.63 | 1.30 | 0.33 | 0.33 | 0.30 | 0.03 | 
| Size 1–10% | 4 | 0.93 | 1.40 | −0.47 | 0.54 | 0.86 | −0.32 | |
| Size 10–25% | 1 | 0.23 | 1.10 | −0.87 | 0.32 | 1.52 | −1.20 | |
| Size 25–75% | 11 | 2.56 | 1.42 | 1.14 | 5.07 | 3.23 | 1.84 | |
| Size 75–99% | 1 | 0.23 | 0.36 | −0.13 | 0.05 | 0.40 | −0.35 | |
| Total | 24 | 5.58 | 5.58 | 6.31 | 6.31 | |||
| Europeans | Size 1 | 8 | 1.88 | 1.38 | 0.50 | 0.40 | 0.35 | 0.05 | 
| Size 1–10% | 2 | 0.47 | 1.15 | −0.68 | 0.24 | 0.67 | −0.43 | |
| Size 10–25% | 2 | 0.47 | 1.38 | −0.91 | 0.62 | 1.79 | −1.17 | |
| Size 25–75% | 11 | 2.59 | 1.57 | 1.02 | 5.31 | 3.65 | 1.66 | |
| Size 75–99% | 2 | 0.47 | 0.40 | 0.07 | 0.38 | 0.49 | −0.11 | |
| Total | 25 | 5.88 | 5.88 | 6.95 | 6.95 | |||
The observed θw and θΠ were obtained by Watterson's θw = K/an and Tajima's θΠ = ∑Πij/(n(n − 1)/2), respectively. The expected θw and θΠ were obtained from θw = K/an, where K is the expected variant sites in each class, and θΠ = θ∑(n − i)/(n(n − 1)/2), respectively.