Table 2.
Differentially regulated clones belonging to cluster 1.
| Clone name | # | GenBank | Sigenae contig | Swissprot_hit_description | Score | Unigene |
| tcac0002.b.13 | 189 | BX081818 | tcac0002c.b.13_3.1.s.om.8 | YBOX1_RAT (P62961) Nuclease sensitive element binding protein 1 (Y-box binding protein 1) (YB-1) | 528 | Omy.6894 |
| tcay0023.c.11 | 190 | BX311374 | tcav0002c.e.18_3.1.s.om.8 | IF2B_HUMAN (P20042) Eukaryotic translation initiation factor 2 subunit 2 (eIF-2-beta) | 1096 | Omy.8419 |
| tcay0023.a.19 | 191 | BX310198 | tcay0023b.a.19_3.1.s.om.8 tcay0002b.h.16_3.1.s.om.8 |
ST1S3_BRARE (Q7T2V2) Cytosolic sulfotransferase 3 (EC 2.8.2.-) (SULT1 ST3) | 1267 | Omy.9054 |
| tcba0022.f.09 | 192 | BX868083 | tcay0021b.l.08_3.1.s.om.8 | NCPR_SALTR (P19618) NADPH – cytochrome P450 reductase (EC 1.6.2.4) (CPR) (P450R) (Fragments) | 1536 | Omy.22976 |
| tcay0017.l.02 | 193 | BX307506 | tcay0017b.l.02_3.1.s.om.8 tcay0017b.l.02_5.1.s.om.8 |
NIPM_HUMAN (O43920) NADH-ubiquinone oxidoreductase 15 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) | 382 | Omy.3888 |
| tcac0006.f.17 | 194 | BX085016 | tcac0006c.f.17_5.1.s.om.8 tcac0001c.e.23_3.1.s.om.8 |
CP2J3_RAT (P51590) Cytochrome P450 2J3 (EC 1.14.14.1) (CYPIIJ3) | 712 | Omy.18165 |
| tcba0023.m.01 | 195 | BX867932 | tcay0010b.o.13_3.1.s.om.8 | EXOS3_HUMAN (Q9NQT5) Exosome complex exonuclease RRP40 (EC 3.1.13) | 668 | Omy.7234 |
| tcac0004.f.21 | 196 | BX083177 | tcac0004c.f.21_5.1.s.om.8 tcac0004c.f.21_3.1.s.om.8 |
CP19A_ORYLA (Q92087) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX) (Estrogen synthetase) (P-450AROM) | 879 | Omy.241 |
| tcac0002.f.11 | 197 | BX081889 | tcac0002c.f.11_3.1.s.om.8 | RNPC2_HUMAN (Q14498) RNA-binding region containing protein 2 (Hepatocellular carcinoma protein 1) (Splicing factor HCC1) | 1708 | Omy.1045 |
| tcbk0013.n.16 | 198 | BX876154 | tcac0004c.f.21_3.1.s.om.8 | CP19A_ORYLA (Q92087) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX) (Estrogen synthetase) (P-450AROM) | 879 | Omy.241 |
| tcbk0006.j.01 | 199 | BX874921 | tcav0003c.p.16_5.1.s.om.8 | PROS_BOVIN (P07224) Vitamin K-dependent protein S precursor | 415 | Omy.4204 |
| tcay0036.n.19 | 200 | BX320625 | tcav0003c.p.16_3.1.s.om.8 tcav0003c.p.16_5.1.s.om.8 |
PROS_BOVIN (P07224) Vitamin K-dependent protein S precursor | 415 | Omy.4204 |
| tcba0006.l.19 | 201 | BX860777 | tcay0018b.i.17_3.1.s.om.8 | TFR1_CRIGR (Q07891) Transferrin receptor protein 1 (TfR1) (TR) (TfR) (Trfr) | 968 | Omy.16719 |
| tcag0002.n.03 | 202 | CT962587 | tcag0002b.n.03_5.1.s.om.8 | CP1A3_ONCMY (Q92109) Cytochrome P450 1A3 (EC 1.14.14.1) (CYP1A3) (CYP1A1) | 2563 | Omy.11738 |
| tcab0003.h.21 | 203 | BX080053 | tcab0003c.h.21_5.1.s.om.8 | RT30_MOUSE (Q9D0G0) Mitochondrial 28S ribosomal protein S30 (S30mt) (MRP-S30) | 104 | Omy.16941 |
| tcak0001.o.11 | 204 | tcaa0001c.e.22_5.1.s.om.8 | RL4A_XENLA (P08429) 60S ribosomal protein L4-A (L1A) | 1161 | Omy.806 | |
| tcbk0003.k.18 | 205 | BX874857 | tcay0003b.p.21_3.1.s.om.8 | RDH3_RAT (P50169) Retinol dehydrogenase 3 (EC 1.1.1.105) (Retinol dehydrogenase type I) (RODH I) | 834 | Omy.2974 |
| tcay0037.m.03 | 206 | BX319609 | tcay0010b.o.11_3.1.s.om.8 | GCST_MOUSE (Q8CFA2) Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT) | 1289 | Omy.6341 |
| 1RT64O23_A_H12 | 207 | CA358010 | tcac0005c.k.07_3.1.s.om.8 | KAD2_BOVIN (P08166) Adenylate kinase isoenzyme 2, mitochondrial (EC 2.7.4.3) (ATP-AMP transphosphorylase) | 979 | Omy.10546 |
| tcbk0003.b.17 | 208 | BX873257 | tcay0016b.b.23_3.1.s.om.8 | UNKNOWN | Omy.8692 | |
| tcay0009.k.05 | 209 | BX302690 | tcay0009b.k.05_3.1.s.om.8 tcay0009b.k.05_5.1.s.om.8 |
HM13_MOUSE (Q9D8V0) Minor histocompatibility antigen H13 (EC 3.4.99.-) (Signal peptide peptidase) (Presenilin-like protein 3) | 1015 | Omy.24131 |
| 1RT36F13_B_C07 | 210 | CA376488 | tcay0002b.c.06_3.1.s.om.8 | TCPQ_PONPY (Q5RAP1) T-complex protein 1, theta subunit (TCP-1-theta) (CCT-theta) | 2366 | Omy.9154 |
| tcaa0001.g.20 | 211 | BX073727 | tcaa0001c.g.20_3.1.s.om.8 tcaa0001c.g.20_5.1.s.om.8 |
TPM4_PIG (P67937) Tropomyosin alpha 4 chain (Tropomyosin 4) | 744 | Omy.20509 |
| tcbk0034.l.08 | 212 | BX878414 | tcbk0003c.j.07_5.1.s.om.8 | CMAH_BRARE (Q6GML1) Cytidine monophosphate-N-acetylneuraminic acid hydroxylase (EC 1.14.18.2) | 2024 | Omy.4470 |
| tcay0031.j.13 | 213 | BX316758 | tcaa0002c.f.05_3.1.s.om.8 | TPM4_PIG (P67937) Tropomyosin alpha 4 chain (Tropomyosin 4) | 772 | Omy.8952 |
| tcbk0045.m.11 | 214 | BX884217 | tcbk0028c.k.18_5.1.s.om.8 | GSTP1_CRIMI (P47954) Glutathione S-transferase P (EC 2.5.1.18) (GST class-pi) | 636 | Omy.20977 |
| tcbk0037.f.02 | 215 | BX889865 | tcbi0036c.o.04_5.1.s.om.8 | AT11B_HUMAN (Q9Y2G3) Probable phospholipid-transporting ATPase IF (EC 3.6.3.1) | 1193 | Omy.18989 |
| 1RT146H05_B_D03 | 216 | CA350003 | tcbk0038c.p.05_5.1.s.om.8 | HSP47_CHICK (P13731) 47 kDa heat shock protein precursor | 904 | Omy.24697 |
| 1RT138M15_A_G08 | 217 | CA386530 | UNKNOWN | |||
| 1RT129O11_A_H06 | 218 | CA385378 | CA385378.1.s.om.8 | JPH2_HUMAN (Q9BR39) Junctophilin-2 (Junctophilin type 2) (JP-2) | 554 | |
| 1RT148P13_B_H07 | 219 | CA368032 | CA350754.1.s.om.8 | CI010_HUMAN (Q9NZB2) Protein C9orf10 | 103 | |
| tcbk0039.a.06 | 220 | BX886884 | tcbk0007c.f.07_5.1.s.om.8 | MDP1_PIG (P22412) Microsomal dipeptidase precursor (EC 3.4.13.19) (MDP) (Dehydropeptidase-I) (Renal dipeptidase) (RDP) | 1230 | Omy.21182 |