Figure 1.

Performance comparison for the LP/DEE method with Gibbs Motif Sampler, MEME and Projection. Performance comparison of the LP/DEE method with Gibbs Motif Sampler, MEME, and Projection when identifying E. coli regulatory sites. Performance is given in terms of the site level sensitivity 1(a)-1(c) and nucleotide performance coefficient 1(d)-1(f). Significance assessment is disregarded. For every transcription factor dataset, the height of the bar indicates the difference in the metric, with bars above zero specifying better performance for LP/DEE and bars below zero otherwise. Plotted are only those datasets for which there is a difference in performance between the pair of methods being compared.