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. 2006 Oct 15;91(8):2976–2990. doi: 10.1529/biophysj.106.083667

TABLE 1.

Summary of the simulated systems and simulation conditions

Simulation Method Water Na+ Cl I [m]
B0 MD 4111 0.00
BN MD 4101 10 0.07
BE MD 3593 264 254 4.00
Z0 MD 4102 0.00
ZN MD 4092 10 0.07
ZE MD 3584 264 254 0.07
BZ0 TMD 4111 0.00
BZN TMD 4101 10 0.07
BZE TMD 3593 264 254 4.00

The codes used in this article to refer to specific simulations are indicated (the letter B or Z denotes the starting conformation; BZ denotes a B-to-Z transition simulation; 0 denotes the absence of counterions; N denotes a neutralizing amount of counterions; and E denotes an excess of counterions). The ionic strength I of the solution is also reported (calculated for the counterions only, in molal units).