Table 2. .
HQ = 90% |
HQ = 70% |
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Population | CEU | ASI | YRI | CEU | ASI | YRI |
SCC with hotspot intensity | .35a | .34a | .34a | .30a | .29a | .34a |
SCC with hotspot width | .06 | −.01 | .05 | −.01 | −.00 | −.01 |
SCC with SNP density in hotspots | .30a | .27a | .40a | .42a | .45a | .50a |
SCC with SNP MAF in hotspots | .35a | .35a | .41a | .32a | .37a | .40a |
Tested significant (P<.05). In calculating the coefficients, we assigned a 1 if a hotspot was detected, and a 0 if it was not.