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. 2006 Sep 28;7:245. doi: 10.1186/1471-2164-7-245

Table 2.

Percentage, relative abundance and relative density of SSRs in the P. infestans, P. sojae, and P. ramorum sequence sets.

Motif length Count Percentage Relative abundance Relative density
P. infestans di 136 8.19 10.82 165.91
tri 1009 60.78 80.25 1054.66
tetra 335 20.18 26.64 328.01
penta 64 3.86 5.09 77.55
hexa 116 6.99 9.23 177.53

P. sojae di 78 1.31 2.67 34.60
tri 4863 81.90 166.26 2214.72
tetra 434 7.31 14.84 187.22
penta 88 1.48 3.01 47.35
hexa 475 8.00 16.24 335.19

P. ramorum di 28 0.99 1.27 15.39
tri 2358 83.09 106.71 1377.36
tetra 199 7.01 9.01 108.79
penta 25 0.88 1.13 16.97
hexa 228 8.03 10.32 204.74

a Percentage was calculated for each organism on the basis of the corresponding total SSRs count

b Relative abundance is defined as the total number of SSR s per Mb of sequence analyzed

c Relative density is defined as a the total sequence length (bp) contributed by each SSR per Mb of DNA of total sequence analyzed