Table 2.
Motif length | Count | Percentage | Relative abundance | Relative density | |
P. infestans | di | 136 | 8.19 | 10.82 | 165.91 |
tri | 1009 | 60.78 | 80.25 | 1054.66 | |
tetra | 335 | 20.18 | 26.64 | 328.01 | |
penta | 64 | 3.86 | 5.09 | 77.55 | |
hexa | 116 | 6.99 | 9.23 | 177.53 | |
P. sojae | di | 78 | 1.31 | 2.67 | 34.60 |
tri | 4863 | 81.90 | 166.26 | 2214.72 | |
tetra | 434 | 7.31 | 14.84 | 187.22 | |
penta | 88 | 1.48 | 3.01 | 47.35 | |
hexa | 475 | 8.00 | 16.24 | 335.19 | |
P. ramorum | di | 28 | 0.99 | 1.27 | 15.39 |
tri | 2358 | 83.09 | 106.71 | 1377.36 | |
tetra | 199 | 7.01 | 9.01 | 108.79 | |
penta | 25 | 0.88 | 1.13 | 16.97 | |
hexa | 228 | 8.03 | 10.32 | 204.74 |
a Percentage was calculated for each organism on the basis of the corresponding total SSRs count
b Relative abundance is defined as the total number of SSR s per Mb of sequence analyzed
c Relative density is defined as a the total sequence length (bp) contributed by each SSR per Mb of DNA of total sequence analyzed