TABLE 2.
Synthetic oligonucleotide primers used for set allotyping by PCR
Gene targeted | Primer sequences (forward; reverse)a | Annealing temp (°C) | Amplicon size (bp) |
---|---|---|---|
set2 | 5′-CAACAGARGYYAATTCAGGTC-3′; | 52 | 499 |
5′-RAYCCTACCATCTTTTGAGAK-3′ | |||
set5 | 5′-CGATACTACTCAKCASMAAG-3′; | 52 | 511 |
5′-TATTCAACACATCGCCCATG-3′ | |||
set7 | 5′-TGCGAGYGAACATKAAGCAA-3′; | 52 | 573 |
5′-SRYRTCACYCATRCGRTKWG-3′ |
R, G/A; Y, C/T; K, G/T; S, G/C; W, T/A; M, A/C.