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. 2006 Aug;44(8):2951–2962. doi: 10.1128/JCM.00725-06

TABLE 1.

Southeast Asian isolates of the historical B. pseudomallei strain collection analyzed by multilocus sequence typing

Strain Source Country Yr ST Allele profile
ace gltB gmhD lepA lipA narK ndh
K96243a Human Thailand 1996 10 1 1 13 1 1 1 1
Antigen 13 Smooth 1965 46 3 1 2 1 1 3 3
Antigen 25 Donutb Malaysia 1965 46 3 1 2 1 1 3 3
Antigen 25 HP Trans-mucb Malaysia 1965 46 3 1 2 1 1 3 3
Antigen 25 Medusab Malaysia 1965 46 3 1 2 1 1 3 3
Antigen 25 Smoothb Malaysia 1965 46 3 1 2 1 1 3 3
Antigen 1188HP-Rc Human Malaysia 1965 99 1 1 4 1 1 4 1
Antigen 1691d Human Malaysia 1965 46 3 1 2 1 1 3 3
Antigen 6066 35 1 6 14 2 8 8 4
Chumphon 76 W-2 Water Thailand 1965 377 3 30 11 3 1 4 3
Hansene Human Vietnam 1966 397 3 12 6 1 1 4 3
J77e Human Vietnam 1965 46 3 1 2 1 1 3 3
Lavicte Human Vietnam 1965 211 3 1 3 1 1 4 1
Loei KK-S2 Soil Thailand 1965 10 1 1 13 1 1 1 1
Loei KK-S2(2) Soil Thailand 1965 10 1 1 13 1 1 1 1
Loei KK-W5(2) Water Thailand 1965 365 3 2 4 1 1 3 1
Nakhon Phanom 32-3 Environment Thailand 1966 375 3 1 4 3 1 4 3
Phangna 64 W Water Thailand 1965 10 1 1 13 1 1 1 1
Pasteur Institute 6068 Vietnam 1964 169 1 1 2 3 8 4 3
Pasteur Institute 6606 Vietnam 1964 35 1 6 14 2 8 8 4
Pasteur Institute 52237 Vietnam 1964 411 1 4 4 3 1 3 1
Pasteur Institute 63503 Vietnam 370 4 2 3 1 1 22 1
Phattalung 49 W-1 Water Thailand 1965 369 3 1 2 1 5 4 3
Phattalung 49 W-2 Water Thailand 1965 289 3 4 11 4 5 4 6
Phattalung 51 W Water Thailand 1965 369 3 1 2 1 5 4 3
Phattalung 52 W-2 Water Thailand 1965 164 3 1 2 3 5 4 3
Phuket 3 W-1 Water Thailand 1965 54 3 1 3 3 1 2 1
Phuket 6 S-1 Soil Thailand 1965 46 3 1 2 1 1 3 3
Ramose Human Vietnam 1966 211 3 1 3 1 1 4 1
Ranong 8 Environment Thailand 1965 409 3 1 36 1 1 4 1
Ranong 70 W Water Thailand 1965 38 1 12 2 1 1 1 1
Ranong 73 W-1 Water Thailand 1965 399 3 1 4 1 1 22 1
Ranong 73 W-2 Water Thailand 1965 227 1 1 2 1 5 4 1
Smith 373 1966 99 1 1 4 1 1 4 1
Smith 384 1966 211 3 1 3 1 1 4 1
Smith 541 1967 410 1 1 11 1 1 4 1
Smith 660 1966 211 3 1 3 1 1 4 1
Smith 001963 1966 403 1 4 3 1 6 1 1
Smith 002025 1966 84 3 1 11 4 5 4 6
Smith 002026 1966 418 1 4 37 3 1 1 1
Smith 002159 1966 419 3 4 37 3 1 1 1
Smith 002559 1966 403 1 4 3 1 6 1 1
Smith 22179 1967 387 1 12 6 1 1 1 1
Smith 22294 1966 387 1 12 6 1 1 1 1
Songkhla 11 W Water Thailand 1965 168 3 1 2 1 5 4 1
Songkhla 21 W-1 Water Thailand 1965 289 3 4 11 4 5 4 6
Songkhla 21 W-2 Water Thailand 1965 228 1 2 3 1 1 4 1
Songkhla 25 W-1 Water Thailand 1965 382 1 1 3 4 5 1 1
Songkhla 25 W-2 Water Thailand 1965 382 1 1 3 4 5 1 1
Songkhla 27 W-1 Water Thailand 1965 369 3 1 2 1 5 4 3
Songkhla 27 W-2 Water Thailand 1965 369 3 1 2 1 5 4 3
Songkhla 34 W-1 Water Thailand 1965 414 3 1 2 1 8 4 3
Songkhla 34 W-2 Water Thailand 1965 84 3 1 11 4 5 4 6
STW 1 Water Thailand 1965 369 3 1 2 1 5 4 3
STW 3 Water Thailand 1965 366 3 1 2 3 8 4 3
STW 4-2 Water Thailand 1965 366 3 1 2 3 8 4 3
STW 5-1 Water Thailand 1965 289 3 4 11 4 5 4 6
STW 7 Water Thailand 1965 376 1 4 2 3 8 4 3
STW 7-2 Water Thailand 1965 376 1 4 2 3 8 4 3
STW 10 Water Thailand 1965 392 1 2 6 1 1 4 1
STW 11-3 Water Thailand 1965 288 3 2 3 2 1 3 1
STW 22-1 Water Thailand 1965 46 3 1 2 1 1 3 3
STW 25 Water Thailand 1965 46 3 1 2 1 1 3 3
STW 26 Water Thailand 1965 385 1 4 11 4 5 4 6
STW 27-2 Water Thailand 1965 70 3 4 11 3 5 4 6
STW 28-2 Water Thailand 1965 415 1 1 11 4 5 4 6
STW 28-5 Water Thailand 1965 376 1 4 2 3 8 4 3
STW 32-1 Water Thailand 1965 389 3 1 11 1 1 4 1
STW 32-3 Water Thailand 1965 407 3 1 3 3 1 2 18
STW 33 Water Thailand 1965 385 1 4 11 4 5 4 6
STW 34 Water Thailand 1965 407 3 1 3 3 1 2 18
STW 35-1 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 36-1 Water Thailand 1965 366 3 1 2 3 8 4 3
STW 38 Water Thailand 1965 84 3 1 11 4 5 4 6
STW 39 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 42 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 43-1 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 44 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 45-1 Water Thailand 1965 289 3 4 11 4 5 4 6
STW 55-2 Water Thailand 1965 289 3 4 11 4 5 4 6
STW 58-1 Water Thailand 1965 289 3 4 11 4 5 4 6
STW 61-2 Water Thailand 1965 372 1 2 3 1 5 22 1
STW 62 Water Thailand 1965 84 3 1 11 4 5 4 6
STW 64 Water Thailand 1965 385 1 4 11 4 5 4 6
STW 66 Water Thailand 1965 384 1 12 3 3 1 4 1
STW 67-1 Water Thailand 1965 374 1 4 11 4 5 2 6
STW 94-1 Water Thailand 1965 164 3 1 2 3 5 4 3
STW 95-1 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 96-2 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 97-1 Water Thailand 1965 84 3 1 11 4 5 4 6
STW 98-1 Water Thailand 1965 51 3 1 2 3 1 4 3
STW 99-2 Water Thailand 1965 380 3 2 2 1 1 4 3
STW 100-1 Water Thailand 1965 15 1 2 2 2 1 3 1
STW 101-1 Water Thailand 1965 84 3 1 11 4 5 4 6
STW 102-3 Water Thailand 1965 84 3 1 11 4 5 4 6
STW 104-1 Water Thailand 1965 51 3 1 2 3 1 4 3
STW 105-1 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 106-1 Water Thailand 1965 54 3 1 3 3 1 2 1
STW 107-1 Water Thailand 1965 372 1 2 3 1 5 22 1
STW 110-1 Water Thailand 1965 51 3 1 2 3 1 4 3
STW 111-2 Water Thailand 1965 164 3 1 2 3 5 4 3
STW 114-1 Water Thailand 1965 369 3 1 2 1 5 4 3
STW 115-2 Water Thailand 1965 51 3 1 2 3 1 4 3
STW 116-2 Water Thailand 1965 289 3 4 11 4 5 4 6
STW 117-4 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 120-1 Water Thailand 1965 389 3 1 11 1 1 4 1
STW 122 Water Thailand 1965 168 3 1 2 1 5 4 1
STW 152 Water Thailand 1966 416 1 1 6 2 1 42 1
STW 154 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 157 Water Thailand 1965 168 3 1 2 1 5 4 1
STW 162-1 Water Thailand 1965 289 3 4 11 4 5 4 6
STW 168-3 Water Thailand 1965 54 3 1 3 3 1 2 1
STW 174 Water Thailand 1965 402 3 1 2 3 1 2 1
STW 175-1 Water Thailand 1965 369 3 1 2 1 5 4 3
STW 176 Water Thailand 1965 401 3 3 2 1 1 4 1
STW 181-1 Water Thailand 1965 51 3 1 2 3 1 4 3
STW 185 Water Thailand 1965 46 3 1 2 1 1 3 3
STW 185-1 Water Thailand 1965 405 1 4 6 2 1 2 1
STW 186-2 Water Thailand 1965 366 3 1 2 3 8 4 3
STW 187-3 Water Thailand 1965 366 3 1 2 3 8 4 3
STW 189-2 Water Thailand 1965 396 3 2 2 3 5 3 1
STW 197-1 Water Thailand 1965 376 1 4 2 3 8 4 3
STW 199-2 Water Thailand 1965 376 1 4 2 3 8 4 3
STW 200-1 Water Thailand 1965 376 1 4 2 3 8 4 3
STW 202-3 Water Thailand 1965 366 3 1 2 3 8 4 3
STW 204-2 Water Thailand 1965 366 3 1 2 3 8 4 3
STW 205-1 Water Thailand 1965 51 3 1 2 3 1 4 3
STW 208 Water Thailand 1965 51 3 1 2 3 1 4 3
STW 208-1 Water Thailand 1965 51 3 1 2 3 1 4 3
STW 214 Water Thailand 1965 84 3 1 11 4 5 4 6
STW 215-1 Water Thailand 1965 408 3 1 2 3 8 4 24
STW 216-2 Water Thailand 1965 400 1 12 3 2 1 8 1
STW 217-2 Water Thailand 1965 383 1 4 6 2 3 1 1
STW 219 Water Thailand 1965 368 3 1 2 3 8 4 1
STW 220-2 Water Thailand 1965 289 3 4 11 4 5 4 6
STW 221-1 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 222-2 Water Thailand 1965 378 18 12 3 2 1 2 1
STW 224-1 Water Thailand 1965 289 3 4 11 4 5 4 6
STW 225-3 Water Thailand 1965 84 3 1 11 4 5 4 6
STW 230-1 Water Thailand 1965 366 3 1 2 3 8 4 3
STW 233-1 Water Thailand 1965 371 1 12 6 2 1 4 1
STW 235-1 Water Thailand 1965 376 1 4 2 3 8 4 3
STW 244-1 Water Thailand 1965 378 18 12 3 2 1 2 1
STW 305 Water Thailand 1965 300 1 1 3 1 1 4 1
STW 307-2 Water Thailand 1965 395 1 3 36 1 1 4 3
STW 312-1 Water Thailand 1965 300 1 1 3 1 1 4 1
STW 358-2 Water Thailand 1965 312 1 4 2 1 1 3 1
STW 359-1 Water Thailand 1965 364 1 3 4 3 1 4 3
STW 362 Water Thailand 1965 364 1 3 4 3 1 4 3
STW 364 Water Thailand 1965 364 1 3 4 3 1 4 3
STW 368-3 Water Thailand 1965 364 1 3 4 3 1 4 3
STW 402 Water Thailand 1965 379 1 2 2 3 5 4 1
STW 406 Water Thailand 1965 164 3 1 2 3 5 4 3
STW 414-1 Water Thailand 1965 390 1 1 14 2 1 22 1
STW 415 Water Thailand 1965 290 3 4 11 3 5 4 1
STW 420-2 Water Thailand 1965 417 18 4 6 2 5 1 3
STW 422 Water Thailand 1965 391 1 2 10 2 1 8 1
STW 424-1 Water Thailand 1965 417 18 4 6 2 5 1 3
STW 426-2 Water Thailand 1965 409 3 1 36 1 1 4 1
STW 429 Water Thailand 1965 413 3 2 6 1 1 3 3
STW 430 Water Thailand 1965 51 3 1 2 3 1 4 3
STW 447 Water Thailand 1965 366 3 1 2 3 8 4 3
STW 487-1 Water Thailand 1965 3 1 1 2 2 5 3 1
STW 539-1 Water Thailand 1965 392 1 2 6 1 1 4 1
STW 551 Water Thailand 1965 385 1 4 11 4 5 4 6
STW 561-1 Water Thailand 1966 393 3 2 3 1 1 4 1
STW 638-1 Water Thailand 1966 398 1 2 3 1 1 22 1
STW 640 Water Thailand 1966 381 1 2 2 1 1 3 1
STW 723 Water Thailand 1966 388 1 1 4 1 1 22 1
STW 729 Water Thailand 1966 394 3 4 11 3 1 4 3
STW 730-1 Water Thailand 1966 404 1 1 4 3 1 4 3
STW 753 Water Thailand 1966 412 1 4 10 1 1 2 1
STW 754 Water Thailand 1966 386 3 1 3 1 1 2 1
STW 760-2 Water Thailand 1966 376 1 4 2 3 8 4 3
STW 765 Water Thailand 1966 70 3 4 11 3 5 4 6
UB-8-Soil 1 Soil Thailand 1965 167 1 1 4 1 1 3 1
UB-8-Soil 2 Soil Thailand 1965 60 3 1 12 1 1 3 1
Ubol 6-1 Environment Thailand 1965 373 3 1 11 2 5 4 1
USAMRU Malaysia 1 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 3 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 4 Malaysia 1964 51 3 1 2 3 1 4 3
USAMRU Malaysia 5 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 7 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 8 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 10 Malaysia 1964 51 3 1 2 3 1 4 3
USAMRU Malaysia 11 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 12 Malaysia 1964 54 3 1 3 3 1 2 1
USAMRU Malaysia 13 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 14 Malaysia 1964 84 3 1 11 4 5 4 6
USAMRU Malaysia 15 Malaysia 1964 84 3 1 11 4 5 4 6
USAMRU Malaysia 16 Malaysia 1964 84 3 1 11 4 5 4 6
USAMRU Malaysia 17 Malaysia 1964 84 3 1 11 4 5 4 6
USAMRU Malaysia 18 Malaysia 1964 406 1 4 13 2 1 1 1
USAMRU Malaysia 19 Malaysia 1964 406 1 4 13 2 1 1 1
USAMRU Malaysia 22 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 23 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 24 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 25 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 26 Malaysia 1964 51 3 1 2 3 1 4 3
USAMRU Malaysia 27 Malaysia 1964 51 3 1 2 3 1 4 3
USAMRU Malaysia 28 Malaysia 1964 289 3 4 11 4 5 4 6
USAMRU Malaysia 29 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 30 Malaysia 1964 46 3 1 2 1 1 3 3
USAMRU Malaysia 31 Malaysia 1964 51 3 1 2 3 1 4 3
USAMRU Malaysia 32 Malaysia 1964 46 3 1 2 1 1 3 3
VW from infected rat Rat Malaysia? 1967 367 3 1 11 1 1 3 1
WRAIR 294 Malaysia 1964 51 3 1 2 3 1 4 3
WRAIR 1188 Human Malaysia 1964 99 1 1 4 1 1 4 1
a

K96243 is the Sanger sequencing B. pseudomallei strain used as a positive control in this study (16).

b

Antigen 25 strains are colonial variants of USAMRU 25.

c

Antigen 1188HP-R is a rough colonial variant of WRAIR 1188.

d

Antigen 1691 is from a human isolate in Kuala Lumpur, 1921 (33).

e

Hansen, J77, Lavict and Ramos strains were isolated from soldiers in Vietnam.