TABLE 1.
Clade | Species | Serovar | Strain | GenBank accession no. | Diffa | Gapsb |
---|---|---|---|---|---|---|
Pathogenic | Leptospira interrogans | Icterohaemorrhagiae | RGAT ATCC 43642T | AY631894 | R | |
Leptospira interrogans | Australis | Ballico | AY996794 | 1 | −1 | |
Leptospira interrogans | Autumnalis | Akiyami A | AY996791 | 1 | −1 | |
Leptospira interrogans | Bulgarica | Mallika | AY996792 | 6 | +1, −1 | |
Leptospira interrogans | Canicola | Hond Utrecht IV | AY996798 | 1 | −1 | |
Leptospira interrogans | Copenhageni | M 20 | AY996790 | 0 | 0 | |
Leptospira interrogans | Hardjo | Hardjoprajitno | AY996796 | 1 | −1 | |
Leptospira interrogans | Hardjo | Lepto-0184 | AY996797 | 1 | −1 | |
Leptospira interrogans | Pomona | Pomona | AY996800 | 2 | −1 | |
Leptospira interrogans | Pyrogenes | Salinem | AY996793 | 0 | −1 | |
Leptospira alexanderi | Manhao 3 | L60T ATCC 700520T | AY631880 | 13 | +1, −1 | |
Leptospira alexanderi | Manzhuang | A23 | AY996803 | 15 | +3, −1 | |
Leptospira alexanderi | Nanding | M 6901 | AY996804 | 12 | +2, −1 | |
Leptospira borgpetersenii | Javanica | Veldrat Batavia 46T ATCC 43292T | AY887899 | 10 | −1 | |
Leptospira borgpetersenii | Ballum | Mus 127 | AY631884 | 10 | −1 | |
Leptospira kirschneri | Cynopteri | 3522 CT ATCC 49945T | AY631895 | 1 | −1 | |
Leptospira kirschneri | Bim | 1051 | AY996802 | 1 | −2 | |
Leptospira kirschneri | Bim | PUO 1247 | AY996801 | 1 | −1 | |
Leptospira noguchii | Panama | CZ 214T ATCC 43288T | AY631886 | 9 | −1 | |
Leptospira santarosai | Shermani | LT 821T ATCC 43286T | AY631883 | 17 | −1 | |
Leptospira santarosai | Georgia | LT 117 | AY996805 | 15 | −1 | |
Leptospira weilii | Celledoni | CelledoniT ATCC 43285T | AY631877 | 13 | −1 | |
Leptospira genomospecies 1 | Sichuan | 79601T ATCC 700521T | AY631881 | 13 | −1 | |
Intermediate | Leptospira inadai | Lyme | 10T ATCC 43289T | AY631896 | R | |
Leptospira inadai | Aguaruna | MW 4 | AY631891 | 0 | 0 | |
Leptospira inadai | Kaup | LT 64-68 | AY631887 | 1 | 0 | |
Leptospira broomii | Not designated | 5399T ATCC BAA-1107T | AY796065 | 3 | 0 | |
Leptospira fainei | Hurstbridge | BUT 6T ATCC BAA-1109T | AY631885 | 7 | 0 | |
Leptospira fainei | Hurstbridge | BKID 6 | AY996789 | 7 | 0 | |
Nonpathogenic | Leptospira biflexa | Patoc | Patoc IT ATCC 23582T | AY631876 | R | |
Leptospira biflexa | Andamana | CH 11 | AY631893 | 1 | 0 | |
Leptospira meyeri | Ranarum | Iowa City FrogT ATCC 43287T | AY631878 | 10 | 0 | |
Leptospira meyeri | Hardjo | Went 5 | AY631889 | 10 | 0 | |
Leptospira meyeri | Semaranga | Veldrat Semarang | AY631892 | 8 | 0 | |
Leptospira wolbachii | Codice | CDCT ATCC 43284T | AY631879 | 6 | 0 | |
Leptospira wolbachii | Gent | Wa Gent | AY631890 | 6 | 0 | |
Leptospira genomospecies 3 | Holland | WaZ HollandT ATCC 700522T | AY631897 | 4 | 0 | |
Leptospira genomospecies 4 | Hualin | LT 11-33T ATCC 700639T | AY631888 | 3 | 0 | |
Leptospira genomospecies 5 | Saopaulo | Sao PauloT ATCC 700523T | AY631882 | 5 | 0 | |
Other | Leptonema illini | Illini | 3055T | AY714984 | R | |
Leptonema illini | Habaki | Habaki | AY996806 | 10 | 0 | |
Turneriella parva | Parva | HT NCTC 11395T | AY293856 | R | ||
Turneriella parva | Parva | S-308-81 | AY398688 | 0 | 0 |
Diff, number of base pairs differing from the prototype strain in that clade. R, prototype strain for that clade.
Gaps, insertion or deletions compared to the prototype strain.