sNRP1 structure and mRNA. (A) Schematic representation
adapted from ref. 13 of NRP1. The a/CUB, b/factor
V/VIII coagulation factor, and c/MAM homology domains as
well as the transmembrane (TM) and cytoplasmic (CYT) domains are
indicated. The number represents positions in the ORF corresponding to
the boundaries of the various domains. (B) Schematic
representation of sNRP1. The sNRP1 protein is identical to NRP1 up to
Ser641, which is in the linker region between the
b/coagulation and c/MAM homology domains and, in
addition, contains three novel amino acids, G642
I643 K644. There is a unique, 28-bp,
intron-derived sequence at the 3′ end of the cDNA. The 5′ end (arrow)
of this sequence has a GT splice donor site, and its 3′ end is followed
by a poly(A)+ tail. The cleavage/polyadenylation
site (AATAAA), which contains a TAA stop codon, is underlined. The
three new amino acids are shown above the codons. (C)
Northern blot analysis of PC3 cell mRNA with probes corresponding to
the a/CUB domain (lane 1), the b/coagulation factor
domain (lane 2), the c/MAM domain (lane 3), and an
oligonucleotide probe complementary to the sNRP1 28-bp, intron-derived
sequence (lane 4). Each lane was loaded with 2 μg of PC3 mRNA.