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. 2006 Sep 11;103(38):13968–13973. doi: 10.1073/pnas.0606433103

Table 1.

Computationally designed N- and C-terminal mutant CaMs

CaMs Designed positions
Site 1
Site 2
Site 3
Site 4
20 22 24 27 31 56 58 60 62 67 93 95 97 100 104 129 131 133 135 140
CaM WT D D D I E D D N T E D D N I E D D D Q E
CaM-CWT T K Q I E S D E I K
CaM-NWT A R D M E R D N E N

All CaM residues that directly coordinate Ca2+ ions with their side chains (positions 20, 22, 24, 31, 56, 58, 60, and 67 for the N-terminal domain and 93, 95, 97, 104, 129, 131, 133, and 140 for the C-terminal domain) were included in the optimization. Residues 62 and 135 also were included because they coordinate Ca2+ ions with their backbone carbonyls. Residues 27 and 100, which do not coordinate Ca2+ ions, but are in close proximity to the ion and help define the Ca2+-binding loop, also were optimized. Bold lettering shows mutations with respect to the WT CaM sequence. –, positions were not included in the calculation for the mutant CaM indicated.