Location and function of NnrR in the FixLJ-FixK2 regulatory cascade of B. japonicum. Details are explained in the text. Note that even though the model suggests a direct hierarchical organization of FixLJ, FixK2, NnrR, and denitrification genes, additional control levels situated in between cannot be excluded. Similarly, N oxide signaling to NnrR may be direct or indirect. The dashed arrow refers to anaerobic activation of nirK (but not of norCBQD) by FixK2, which is retained in an nnrR mutant background. Filled boxes symbolize putative binding sites for FixK2 and NnrR which are similar to that of the consensus FNR box (TTGAT-N4-ATCAA).