Table 3.
Overlap with PhastCons and MAGE genes
| Overlap with TSS of MAGE genes | % of overlap with | |||
| Program | #CGI | Average length ± SD | Alus | PhastCons |
| newcpgreport | 2 | 271.0 ± 18.4 | 19.49 | 23.73 |
| CpGProD | 3 | 1,314.3 ± 525.1 | 23.40 | 13.31 |
| CpGIS | 3 | 800.0 ± 243.3 | 10.52 | 20.59 |
| CpGIE | 3 | 1,093.0 ± 476.1 | 23.99 | 14.00 |
| CpGED | 2 | 730.5 ± 320.3 | 15.32 | 15.82 |
| CpGcluster | 8 | 258.3 ± 100.8 | 6.79 | 28.53 |
Predicted CpG islands in 10 MAGE genes (left part) and percentage of overlap between the CpG-islands predicted in the human chromosome 22 and both Alu retrotransposons and PhastCons (evolutionarily conserved elements).