TABLE 1.
Primers used for PCR and to amplify Tn4001 insertion sites
| Primer designation | Sequence | Gene | Orientation | Reference(s) or source |
|---|---|---|---|---|
| ISb1 | 5′-AAGTCCTCCTGGGTATGT-3′ | IS256 arm of Tn4001 | Reverse | 5, 18 |
| GAf4 | 5′-GGTGGTAACGGTACATGAGTT-3′ | gapAa | Forward | This studyb |
| gapA3F | 5′-TTCTAGCGCTTTARCCCTAAACCC-3′ | gapAa | Forward | This studyb |
| gapA4R | 5′-CTTGTGGAACAGCAACGTATTCGC-3′ | gapAa | Reverse | This studyb |
| GENTA5 | 5′-TATGAAAAAGGTGATAAATAAATG-3′ | Gentamicin | Forward | 6 |
| GENTA6 | 5′-AATTTCTGGTGTTAAAAAAGTTCC-3′ | Gentamicin | Reverse | 6 |
| MG13 | 5′-GCTTCCTTGCGGTTAGCAAC-3′ | 16S rRNA of M. gallisepticum | Forward | 22 |
| MG14 | 5′-GAGCTAATCTGTAAAGTTGGTC-3′ | 16S rRNA of M. gallisepticum | Reverse | 22 |
| MSL1 | 5′-GAGAAGCAAAATAGTGATATCA-3′ | 16S rRNA of M. synoviae | Forward | 22 |
| MSL2 | 5′-CAGTCGTCTCCGAAGTAAACAA-3′ | 16S rRNA of M. synoviae | Reverse | 22 |
GenBank accession number AF214004.
M. Garcia, University of Georgia, personal communication.