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. 2000 Mar 14;97(7):3160–3165. doi: 10.1073/pnas.060027897

Figure 4.

Figure 4

Histogram comparison of the electrostatic potential Φel,i at the positions of catalytically important atoms for N-protonation. The value of Φel,i was calculated in each case at grid points coinciding with the position of the catalytically important atom of the residue, i.e., N(1), C(7), O(8), Oγ(S70) (=S70′), N(S70) (=S70′′), Nɛ(K73), Oγ(S130), Oɛ1,2(E166), Nɛ(K234), N(A237), and O(WAT297). The value for Oɛ1,2(E166) is given at the grid point midway between the two carboxylate oxygens. Although the N(1), C(7), and O(8) atoms do not occur in the free enzyme E, the values of Φel,i are given at the grid points that are occupied by these atoms in the ES complex.