Table 3.
Bulge loop initiation enthalpy parametersa
Bulge length | (kcal/mol) | SE (kcal/mol) |
---|---|---|
1 | 10.6 | 1.2 |
2 | 7.1 | 4.3 |
3 | 7.1 | 11.7 |
n ≥ 4 | (7.1) | — |
aNote that the nearest neighbor parameter for stacking of adjacent base pairs is added for bulges with 1 nt. For bulges with >1 nt, calculation of the stabilities of adjacent helices includes the terminal AU penalty terms for AU or GU pairs adjacent to the bulge.