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. 2006 Nov 1;35(Database issue):D110–D115. doi: 10.1093/nar/gkl796

Figure 4.

Figure 4

The U12DB single-intron view. This view provides more detail on the intron returned by the query. The splice junction sequences are color-coded as in Figure 2. In addition, the user can choose to display the intronic sequence or the gene sequence. For certain species, one can also link to UCSC genome browser where a user-defined track will display the intron position. The transcript view provides a visualization of the intron with respect to the Ensembl transcripts. The transcripts are clickable and link to the corresponding ExonView in Ensembl. The U12DB introns are also clickable and link to the intron record in U12DB. This is useful in the case of two or more U12-type introns that are located in the same gene.