Table 2.
2DL2 | 2DL3 | 2DL5A | 2DL5B | 2DS1 | 2DS2 | 2DS3 | 2DS4* 001-002 | 2DS4* 003 | 2DS5 | 3DL1 | 3DS1 | ||
2 | Δ | -0.004 | 0.097 | 0.025 | 0.019 | 0.01 | 0.004 | 0.036 | 0.03 | 0.001 | 0.006 | 0.031 | 0.003 |
D | R | -0.055 | 0.69 | 0.597 | 0.586 | 0.241 | 0.055 | 0.924 | 0.761 | 0.011 | 0.193 | 0.201 | 0.064 |
L | H | 0.246 | 0.623 | 0.168 | 0.14 | 0.15 | 0.246 | 0.18 | 0.117 | 0.539 | 0.115 | 0.685 | 0.159 |
1 | P | < 0.0001 | < 0.05 | ||||||||||
2 | Δ | -0.137 | 0.014 | 0.101 | 0.013 | 0.205 | 0.099 | 0.012 | -0.031 | 0.003 | -0.005 | 0.025 | |
D | R | -1.186 | 0.106 | 0.990 | 0.096 | 0.944 | 0.811 | 0.1 | 0.295 | 0.026 | 0.087 | 0.196 | |
L | H | 0.071 | 0.07 | 0.149 | 0.077 | 0.304 | 0.156 | 0.071 | 0.181 | 0.05 | 0.252 | 0.087 | |
2 | P | < 0.0001 | < 0.0001 | < 0.0001 | < 0.0001 | ||||||||
2 | Δ | 0.001 | -0.096 | 0.001 | -0.115 | -0.086 | -0.022 | 0.025 | -0.016 | 0.007 | -0.028 | ||
D | R | 0.022 | -1.774 | 0.012 | -1 | -1.333 | -0.347 | 0.120 | -0.301 | 0.054 | -0.407 | ||
L | H | 0.12 | 0.005 | 0.135 | 0.092 | 0.032 | 0.1 | 0.471 | 0.084 | 0.549 | 0.102 | ||
3 | P | < 0.0001 | < 0.001 | < 0.001 | |||||||||
2 | Δ | 0.02 | 0.135 | 0.022 | 0.04 | -0.05 | -0.052 | 0.108 | -0.051 | 0.133 | |||
D | R | 0.162 | 0.886 | 0.167 | 0.269 | -0.341 | -0.835 | 0.887 | -1.35 | 0.863 | |||
L | H | 0.047 | 0.171 | 0.078 | 0.071 | -0.016 | 0.069 | 0.135 | 0.096 | 0.168 | |||
5A | P | < 0.0001 | < 0.001 | < 0.0001 | < 0.05 | ||||||||
2 | Δ | 0.019 | 0.104 | 0.119 | -0.01 | -0.022 | 0.01 | -0.035 | 0.018 | ||||
D | R | 0.162 | 1.022 | 0.969 | -0.078 | -0.445 | 0.071 | -1.157 | 0.147 | ||||
L | H | 0.050. | 0.152 | 0.146 | 0.02 | 0.08 | 0.032 | 0.1 | 0.048 | ||||
5B | P | < 0.0001 | < 0.0001 | ||||||||||
2 | Δ | 0.021 | 0.028 | -0.05 | -0.08 | 0.115 | -0.047 | 0.127 | |||||
D | R | 0.156 | 0.195 | -0.348 | -1.212 | 0.962 | -1.18 | 0.839 | |||||
S | H | 0.085 | 0.064 | 0.012 | 0.056 | 0.146 | 0.119 | 0.167 | |||||
1 | P | < 0.05 | < 0.0001 | < 0.05 | < 0.0001 | < 0.0001 | |||||||
2 | Δ | 0.106 | 0.016 | -0.02 | 0.01 | -0.005 | 0.025 | ||||||
D | R | 0.868 | 0.132 | 0.185 | 0.103 | -0.087 | 0.196 | ||||||
S | H | 0.163 | |||||||||||
2 | P | < 0.0001 | 0.075 | 0.192 | 0.058 | 0.252 | 0.087 | ||||||
2 | Δ | -0.011 | -0.032 | 0.003 | -0.051 | 0.04 | |||||||
D | R | -0.076 | -0.537 | 0.028 | -1.425 | 0.275 | |||||||
S | H | 0.022 | 0.09 | 0.031 | 0.096 | 0.075 | |||||||
3 | P | < 0.001 | |||||||||||
2 | Δ | -0.107 | -0.039 | 0.0003 | -0.039 | ||||||||
D | R | -1.811 | -0.321 | 0.009 | -0.271 | ||||||||
S | H | 0.019 | 0.011 | 0.155 | -0.003 | ||||||||
4*001 *002 | P | < 0.0001 | < 0.01 | < 0.05 | |||||||||
2 | Δ | -0.061 | 0.108 | -0.07 | |||||||||
D | R | -1.24 | 0.804 | -1.108 | |||||||||
S | H | 0.041 | 0.661 | 0.063 | |||||||||
4*003 | P | < 0.05 | < 0.000 | < 0.05 | |||||||||
2 | Δ | -0.056 | 0.105 | ||||||||||
D | R | -1.876 | 0.862 | ||||||||||
S | H | 0.068 | 0.135 | ||||||||||
5 | P | < 0.05 | < 0.0001 | ||||||||||
3 | Δ | -0.076 | |||||||||||
D | R | -2.01 | |||||||||||
L | H | 0.085 | |||||||||||
1 | P | < 0.05 |
Δ = linkage disequilibrium parameters;R = relative linkage disequilibrium;H = estimated two locus haplotype frequency;P = p value