TABLE 1.
Virus clonea | Isolation dayb | Coreceptor use
|
IC90 at time (days) from onset of acute infection symptomsd:
|
|||||||
---|---|---|---|---|---|---|---|---|---|---|
Infectivity (103 FFU/ml) for NP2/CD4:
|
Classificationc | |||||||||
CD4 alone | CCR3 | CCR5 | CXCR4 | 20 | 81 | 608 | 957 | |||
8.2.50 | 12 | 0.3 | 1,200 | 1,400 | 0.3 | R3/R5 | <10f | 10 | 20 | 40 |
8.2.51 | 12 | —e | 150 | 90 | 0.3 | R3/R5 | <10 | 10 | 80 | 80 |
8.4.51 | 32 | 0.2 | 10 | 270 | 1 | R3/R5 | <10 | 10 | 40 | 40 |
8.8.3 | 608 | — | 80 | 120 | 0.1 | R3/R5 | <10 | 10 | 80 | 80 |
8.8.4 | 608 | — | 40 | 470 | 2 | R3/R5 | <10 | 10 | 20 | 20 |
8.8.8 | 608 | — | 6 | 150 | 0.4 | R3/R5 | <10 | 10 | 80 | 80 |
8.9.B | 957 | — | 110 | 280 | 230 | R3/R5/X4 | <10 | <10 | <10 | <10 |
8.9.D | 957 | — | 280 | 700 | 320 | R3/R5/X4 | <10 | <10 | <10 | <10 |
8.9.F | 957 | — | 0.2 | 1 | — | R3/R5 | <10 | <10 | 20 | 10 |
8.9.H | 957 | — | 140 | 340 | 590 | R3/R5/X4 | <10 | <10 | <10 | <10 |
8.9.I | 957 | — | — | 740 | 2 | R5 | <10 | <10 | <10 | <10 |
8.9.J | 957 | — | 70 | 140 | 150 | R3/R5/X4 | <10 | <10 | <10 | <10 |
8.9.K | 957 | — | — | 120 | — | R5 | <10 | <10 | <10 | <10 |
YU2g | NAh | — | 1,700 | 4,800 | — | R3/R5 | NDi | ND | ND | ND |
SDM4j | NA | — | 9 | 16 | — | R3/R5 | <10 | <10 | <10 | <10 |
Replication-competent molecular clone containing gp120 cloned directly from patient peripheral blood mononuclear cells (days 12 and 32) or plasma (days 608 and 957), and inserted into an HIV-1HXB2 based vector.
Time point from which the patient envelope was amplified, in days from onset of symptoms characteristic of primary HIV-1 infection.
Viruses were classified as dual-or triple-tropic if their titer on alternative coreceptors was within 1.5 log10 of the titer obtained on the dominant coreceptor cell line.
Titers are expressed as the reciprocal dilution of serum required to reduce infectivity by ≥90% (IC90), as measured by immunostaining of infected NP2/CD4/CCR5 cells against virus incubated with 10% (1:10) normal human serum.
—, ≤100 FFU/ml.
Less than 90% neutralization was observed at the lowest serum dilution (1:10) tested.
The titer the of prototypical CCR3-using HIV-1 virus YU2 on NP2 cells has been included for comparison.
NA, not applicable.
ND, not determined.
SDM4, site-directed mutant 4 (see Fig. 3>).