TABLE 2.
LTR no. | Parenchyma library
|
Seminoma library
|
||
---|---|---|---|---|
Transcript levela (% of beta-actin gene transcript level) | ELT frequency (%) | Transcript levela (% of beta-actin gene transcript level) | ELT frequency (%) | |
62 | 0.004 ± 0.001 | 0 | 0.014 ± 0.003 | 0.24 |
80 | 0.16 ± 0.04 | 0.25 | 0.17 ± 0.03 | 0.24 |
81 | 1.4 ± 0.4 | 15.19 | 0.15 ± 0.03 | 1.44 |
99 | 2.9 ± 0.2 | 32.66 | 0.45 ± 0.10 | 5.05 |
100 | 0 | 0 | 0.016 ± 0.007 | 0.24 |
108 | 0.26 ± 0.09 | 0.50 | 0.013 ± 0.005 | 0 |
109 | 0 | 0 | 0 | 0 |
113 | 0.17 ± 0.03 | 0.25 | 0.23 ± 0.05 | 0.24 |
115 | 0.02 ± 0.005 | 0.25 | 0.019 ± 0.006 | 0.24 |
129 | 0.24 ± 0.03 | 3.61 | 0.054 ± 0.007 | 0 |
131 | 0.013 ± 0.004 | 0 | 0.014 ± 0.002 | 0.24 |
138 | 0.032 ± 0.013 | 0.25 | 0 | 0 |
139 | 0.16 ± 0.05 | 1.77 | 0.12 ± 0.02 | 0.72 |
140 | 0.13 ± 0.04 | 0.25 | 0.085 ± 0.017 | 0 |
141 | 0.01 ± 0.003 | 0 | 0.014 ± 0.003 | 0.24 |
145 | 0.35 ± 0.06 | 2.79 | 0.23 ± 0.04 | 1.68 |
149 | 0.24 ± 0.03 | 1.52 | 0.054 ± 0.016 | 0.48 |
152 | 0.12 ± 0.02 | 0.76 | 0.92 ± 0.17 | 11.30 |
155 | 0.059 ± 0.014 | 0.76 | 0.44 ± 0.07 | 4.57 |
5′-proviral LTRs | 1.08 ± 0.09 | 14.94 | 5.58 ± 0.88 | 44.47 |
Relative transcript levels were measured by RT-PCR.