TABLE 3.
LTR no. | ELT content (%)a
|
LTR no. | ELT content (%)a
|
|||
---|---|---|---|---|---|---|
Testicular parenchyma | Seminoma | Testicular parenchyma | Seminoma | |||
3 | 0 | 0.24 | 100 | 0 | 0.24 | |
9 | 0 | 0.48 | 101 | 0.50 | 0.72 | |
10 | 1.01 | 1.20 | 105 | 0 | 0.24 | |
22 | 0 | 0.24 | 106 | 1.01 | 0 | |
24 | 0.25 | 0 | 107 | 0.25 | 0.48 | |
25 | 0.25 | 0.48 | 108 | 0.50 | 0 | |
27 | 0 | 0.24 | 110 | 0 | 0.48 | |
28 | 0.25 | 0 | 112 | 0.25 | 0.48 | |
30 | 0.50 | 0 | 113 | 0.25 | 0.24 | |
32 | 0.50 | 0 | 115 | 0.25 | 0.24 | |
33 | 0.25 | 0 | 116 | 0.50 | 3.61 | |
34 | 0.50 | 0 | 117 | 0.25 | 0 | |
35 | 0 | 0.48 | 118 | 0.25 | 0 | |
44 | 0 | 0.24 | 119 | 0 | 0.24 | |
45 | 0.50 | 0 | 120 | 1.52 | 0 | |
46 | 0.76 | 0.48 | 121 | 0.25 | 0 | |
51 | 0.25 | 0.24 | 122 | 0 | 0.24 | |
52 | 0.25 | 0 | 124 | 0.25 | 0.24 | |
53 | 0.50 | 0 | 129 | 0 | 3.61 | |
58 | 0.25 | 0 | 130 | 0.50 | 0 | |
61 | 1.27 | 1.44 | 131 | 0 | 0.24 | |
62 | 0 | 0.24 | 134 | 0 | 0.72 | |
65 | 0 | 0.48 | 138 | 0.25 | 0 | |
66 | 0.50 | 0.24 | 139 | 1.77 | 0.72 | |
76 | 0.50 | 0 | 140 | 0.25 | 0 | |
79 | 2.53 | 0.96 | 141 | 0 | 0.24 | |
80 | 0.25 | 0.24 | 142 | 1.27 | 0.48 | |
81 | 15.19 | 1.44 | 143 | 0.25 | 0 | |
82 | 0 | 0.24 | 144 | 0 | 0.48 | |
83 | 0.50 | 0 | 145 | 2.79 | 1.68 | |
84 | 0.50 | 0.96 | 147 | 5.57 | 1.44 | |
86 | 0 | 0.24 | 148 | 0 | 0.48 | |
89 | 0.25 | 0.48 | 149 | 1.52 | 0.48 | |
90 | 0 | 0.48 | 150 | 0.25 | 0 | |
91 | 0 | 0.24 | 152 | 0.76 | 11.30 | |
92 | 0.25 | 0 | 153 | 0.25 | 0.48 | |
93 | 0.50 | 0.72 | 154 | 0.50 | 0.48 | |
97 | 0 | 1.20 | 155 | 0.76 | 4.57 | |
98 | 1.01 | 1.20 | 5′-proviral LTRs | 14.94 | 44.47 | |
99 | 32.66 | 5.05 |
The relative ELT content was calculated as the ratio of the number of tags for each individual HS LTR to the total number (395 and 419 for the testicular parenchyma and seminoma, respectively) of all ELTs in the sequenced library. For 5′ proviral LTRs, summarized values are given.