TABLE 2.
Strain | Hydrophobic domain of NS5B or 3Aa | EMBL accession no. |
---|---|---|
HCV 1a | RWFWFCLLLLAAGVGIYLLPNR | AF009606 |
HCV 1b | RWFMWCLLLLSVGVGIYLLPNR | AJ238799 |
HCV 2a | RLLLFGLLLLFVGVGLFLLPAR | AAY24373 |
HCV 2b | RLLLLCLLLLSVGVGIFLLPAR | AAP55704 |
HCV 3a | RYLLLCLLLLTVGVGIFLLPAR | AF046866 |
HCV 3b | RHLLLCLLLLTVGVGIFLLPAR | BAA08372 |
HCV 4a | RYLLLCLLILTVGCGIFLLPAR | CAA72338 |
HCV 4b | RWFMWCLLLLSVGVGIYLLPNR | CAA43793 |
HCV 5a | RNLLLCLLLLSVGVGIFLLPAR | CAA73640 |
HCV 6a | RFLLLGLLLLTVGVGIFLLPAR | CAA72801 |
HCV 6b | RMLLLCLLLLSVGVSIFLLPAR | BAA07103 |
BVDV C | PIVNLLLRRLRVLLMAAVGASS | Q96662 |
BVDV N | PIVNLLLRRLKILLMTAVGVSS | P19711 |
PV1 (M) | AMTILQAVTTFAAVAGVVYVMY | NP740474 |
Conserved amino acids are in bold.